Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3948 ATGGAAGATCAAGAGAAAGCGAAAGGGCTAATGAAACCTCAAAATTTAGGCACTGAATTAACAGCACTTGTTGTAGATGATGATAAGCTTGTTCGAATGATTCATCAAGGTCTATTGAAAAGAGCTGGTGTGAAAAGTGAAGCTGTAAAAAATGGTAAAGAAGCTGTAGATATTCATTGCAGTGGTCAAAGATTTGATATAATTCTCATGGATAAGGAAATGCCTATCATGAATGGGATTGAGGCAACCAAGAAACTGCGATCGATGGGTATTCACAGCATGATTGTCGGTGTGTCATCGTGTACAGAAGCAGAAAAACAAGAATTTATGGAAGCAGGGCTAAATGACTATCAAGTGAAACCATTGACCATCAGTGTGCTTAATTCGATTCTTGATGTTGTAAAAGCTAGCAAGTAG 417 0.3789 MEDQEKAKGLMKPQNLGTELTALVVDDDKLVRMIHQGLLKRAGVKSEAVKNGKEAVDIHCSGQRFDIILMDKEMPIMNGIEATKKLRSMGIHSMIVGVSSCTEAEKQEFMEAGLNDYQVKPLTISVLNSILDVVKASK* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3948 138 CDD REC_hyHK_CKI1_RcsC-like 23 131 - -
Mal3g3948 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 136 - -
Mal3g3948 138 SMART REC_2 20 131 IPR001789 GO:0000160
Mal3g3948 138 SUPERFAMILY CheY-like 19 134 IPR011006 -
Mal3g3948 138 ProSiteProfiles Response regulatory domain profile. 21 135 IPR001789 GO:0000160
Mal3g3948 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 136 - -
Mal3g3948 138 Pfam Response regulator receiver domain 23 130 IPR001789 GO:0000160
Mal3g3948 138 Gene3D - 2 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3948 Mal-Chr3 117717418 117718007 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3948 20 123 Response Regulator Gene Family AT3G04280 52.336 1.03e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal3g3948 Response_reg 5.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3948 - - cam:101506170 191.815