Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3925 ATGGCTTTCAATGAAATCTTGGCTACAACGTTGTATTCTTCAAAAGGGTCATTGTGGAATACCCTTTTGAGTAAGATCCTTGGATTGCCTGTTTTGGAACTTGTGGCAATATGTACTAATTTGGTTGTTCTTGTTTTGTTTCTTTTGAGGGAGGTTTTTTACTGTATTGGTGGAAGAGTTTGGTTTTTTAAGGATAATGATGATAATGTTCTTGTTGGCAATGGTGGTTTGGTTCGTGCTAGTGATGATGGAGAAACTTTTGATGTTAGAATTGGGACATGGTTTAAGTTGTCGGTGTTGTCTTGTTTGTATGTCCTGTTGGTGCAAGTTTTGGTTTTGGGATTCGATGGTGTTGCTTTGATTAAGGAGGAGAATTTTGTGGTTGGGGATTTGTCTCTTCTGTCGGTGCCGTTTGTGCAGTGTTTGGTTTGGATTGTGTTGAGCTTCACTGCTTTGCGTTGCAAATACAAGGTGTATCAGAAGTTTCCAATTTTGCTGAGAGTTTCTTGGTTTGTGTTGTTTGTCGTTTGCTTGTGTGGTTTGTATGTTGATGGGAGAGGGTTTTGGGTGGAAGGTTCCAAGCATATGCGTTCTCATGTTGTGGCGAATTTCGCTGCTACCCCTGCTCTTGCCTTCCTTTGTATTGTAGCAATGAGGGGTGTTTCTGGTATTCAAGTTTGTAGGAATTCTGAGAATCAACAGCCGTTACTTCTTGACGAAGATGAAGACGAAGAACCGGGTTGCCTCAAGGTTACTCCTTATCGTGATGCTGGCCTTTTTAGCTTGGCCACTCTGTCTTGGCTTAACTCAATTCTTTCTATTGGTGCAAAGAGACCACTTGAGCTTAAGGACATTCCCCTTGTTGCGCCTAAAGATCGAGCCAAAACAAATTTTAAGGTTTTGAATTCTAATTGGGAGAAAATGAAGGCTGAAAACTCGCCGACTCAGCCTTCATTAGCTTGGACACTTCTCAAGTCATTCTGGAAGGAGGCAGCTATTAATGCCATTTTTGCTGGTGTCACTACTCTTGTCTCATATGTAGGTCCATACATGATAAGTTACTTTGTTGATTACTTGAGTGGTATAGAGACTTTCCCTCATGAGGGGTATGTCCTTGCAGGGATATTCTTTGTTGCAAAGCTTGTGGAGACCTTCACAACGAGACAATGGTATCTAGGAGTTGACATCTTGGGGATGCATGTTAGGTCCGCTTTAACTGCGATGGTATATCAAAAGGGGCTTAGGTTATCGAGCTTGGCCAGGCAAAGTCACACAAGTGGTGAGATTGTTAACTACATGGCTATTGATGTTCAGAGGGTAGGGGACTATGCTTGGTATCTTCATGACATGTGGATGCTTCCCCTGCAGATTGTTTTAGCCCTCGCAATTTTGTATAAGAATGTTGGAATTGCATCTGTTGCGACACTTGTTGCTACAATCATTTCCATCGTAATCACTGTTCCCGTGGCTCGGATCCAAGAAGATTATCAAGACAAATTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCTGAGTGCCTAAGGAACATGAGGATTCTCAAGCTGCAGGCTTGGGAGGACAGATATCGAATAAGATTGGAGGAAATGCGAGGAGTAGAGTACAAGTGGCTTAAGAAAGCCCTCTACTCTCAGGCTTTCATAACTTTCATGTTCTGGAGCTCACCTATATTTGTTTCAGCCGTCACTTTTGCTACGTCCATATTATTGGGCGGTCAGTTGACTGCAGGTGGTGTACTTTCAGCTCTAGCTACTTTCAGGATCCTCCAAGAACCGTTGAGGAATTTTCCAGACTTGGTATCTACAATGGCTCAGACAAAAGTTTCTCTTGATCGGCTATCTTGTTTCCTGCTGGAGGAAGAATTGCAGGAAGATGCAACTACTGTCTTGCCACAAGGTGTTTCTAACATTGCTATAGAAATTAAGGATAGTGAATTCTCTTGGGACCCTTCTTCATCTTCCAGGCCTACGCTTTCAGAGATAAATATGAAAGTTGAAAAAGGGATGCGTGTGGCTGTTTGTGGTACAGTTGGTTCAGGGAAATCAAGTTTCCTTTCTTGCATCCTCGGAGAGATTCCTAAGCTTTCTGGTGAAGTCAGTGTGTGTGGTTCTGCTGCATATGTCTCCCAATCAGCATGGATACAATCAGGAACTATAGAAGAAAACATCCTCTTTGGAAGCCCAAAGGACAAACCAAAGTACAAGAATGTTATTCATGCCTGTTCACTGAAAAAGGATCTAGAACTTTTCTCACATGGAGATCAGACAATTATTGGTGATAGAGGTATAAACCTGAGTGGAGGTCAGAAGCAGCGGGTACAGCTTGCTCGTGCACTCTACCAAGATGCTGATATTTATCTCCTTGATGACCCCTTCAGCGCAGTTGACGCACACACTGGATCAGAGTTGTTTAGGGAGTATATATTGACGGCACTTGCAAATAAAACAGTAATTTTCGTGACCCATCAAGTTGAATTTCTTCCTGCTGCTGATTTGATACTGGTTCTCAAGGAAGGTTGCATCATACAAGCCGGAAAGTATGATGATCTTTTACAAGCAGGAACAGATTTTAAAGCTCTAGTTTCAGCTCACCATGAAGCCATAGAGGCAATGGATATCCCTAGTCACTCCTCTGAAGATTCAGATGAAAATTTATCATTGGAGGCATCTGTTATGACCAGTAAGAAATCCATTTGTTCTGCGAACGATATTGACAGTTTGACAAAGGAAATGCAAGATGGACCATCGGCTTCAGATCAAAAAGCAATTAAGGAGAAGAAGAAAGCAAAAAGATCGAGAAAAAAACAGCTTGTTCAGGAAGAAGAGAGGGTTAGAGGTAGAGTCAGCATGAAGGTGTATCTTTCATACATGGCAGCGGCATATAAAGGTTTATTGATTCCACTCATAATCATCGCGCAAGCGTTATTTCAGTTCCTTCAGATTGCTAGTAATTGGTGGATGGCGTGGGCTAACCCTCAAACAGAAGGAGACCAGCCCAAAGTAAAACCCATGATTCTTCTTCTTGTTTACATTGCCCTTGCTTTCGGCAGTACATGGTTTATATTTGTAAGGGCTGTTCTAGTCGCTACATTTGGTCTTGCAGCTGCACAGAAACTATTTTTGAAGATGCTTAGATGTGTTTTCCATGCACCTATGTATTTCTTTGATTCTACACCAGCTGGAAGGATTTTGAACCGGGTTTCAGTTGATCAAAGTGTTGTTGATCTTGACATCCCTTTTAGACTTGGCGGGTTTGCTGCAACAACAATACAGCTTATTGGTATTGTTGGTGTAATGACAGAAGTAACATGGCAAGTTTTGCTCTTAGTCATCCCAATGGCCATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCATCAAGGGAACTAGTCCGTATTGTAAGCATTCAGAAATCACCAATCATAAATCTTTTTGGTGAATCAATTGCCGGAGCATCCACCATCAGAGGTTTCGGACAAGAAAAAAGGTTTATGAAGCGAAACCTCTATCTACTTGATTGTTTTGCGCGGCCATTCTTCTGCAGTCTTGCTGCTATTGAGTGGCTCTGCCTGCGTATGGAGTTATTGTCAACTTTTGTATTTGCTTTCTGCATGGTATTGCTTGTAAGCTTTCCCCGTGGAAGTATTGACCCCAGCATGGCTGGACTTGCTGTGACATACGGTCTGAATTTAAATGCGCGTTTATCCCGTTGGATACTTAGCTTTTGCAAACTTGAAAACAAAATTATATCTATTGAAAGGATTTATCAGTACAGCCAAATTCCTAGTGAAGCACCAGCAATTATTGAAGATTCCCGCCCGCCATCCTCATGGCCTGTAAATGGGACGATTGAAATATTTGATTTGAAGGTCCGTTACAAAGAAAATCTTCCTTTGGTGCTTCATGGAGTATCATGCACATTTCCTGGTGGGAAGAATATAGGAATAGTTGGACGCACCGGCAGTGGCAAATCTACTTTGATTCAAGCATTATTTCGATTGATTGAACCAGCAGGCGGAAGTATCCATATAGACAACATCAATATTTTAGAGATTGGTCTTCATGACCTCCGAAGCCATCTCAGTATCATACCACAAGATCCAACCTTATTTGAAGGGACCATTCGAGGAAATCTTGATCCTCTTGAGGAGCACTCAGATAAAGATATTTGGGAGGCACTAGATAAATCTCAACTTGGAGAGATCATCCGTGAGAAAGGACAAAAGCTCAATACACCAGTTATAGAAAATGGAGATAATTGGAGTGTAGGGCAGCGACAACTTGTTTCTCTTGGCCGAGCTCTACTGAAGCAGTCAAAAATACTTGTTCTTGATGAAGCAACAGCATCCGTCGACACAGCCACTGATAATCTTATCCAGAAGATTATTCGAACAGAGTTCAAAGACTGCACTGTACTTACCATTGCACATCGTATTCCTACTGTCATTGACAGCGATCAAGTTCTGGTGCTCAGTGATGGTCGAGTTGCTGAGTTTGACACTCCGTTACGACTACTAGAGGACAAGTCATCCATGTTTCTAAAGTTGGTGACTGAGTATTCCTCGCGGTCGAGTGGTGTACCAGAATTTTAG 4617 0.4204 MAFNEILATTLYSSKGSLWNTLLSKILGLPVLELVAICTNLVVLVLFLLREVFYCIGGRVWFFKDNDDNVLVGNGGLVRASDDGETFDVRIGTWFKLSVLSCLYVLLVQVLVLGFDGVALIKEENFVVGDLSLLSVPFVQCLVWIVLSFTALRCKYKVYQKFPILLRVSWFVLFVVCLCGLYVDGRGFWVEGSKHMRSHVVANFAATPALAFLCIVAMRGVSGIQVCRNSENQQPLLLDEDEDEEPGCLKVTPYRDAGLFSLATLSWLNSILSIGAKRPLELKDIPLVAPKDRAKTNFKVLNSNWEKMKAENSPTQPSLAWTLLKSFWKEAAINAIFAGVTTLVSYVGPYMISYFVDYLSGIETFPHEGYVLAGIFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYQKGLRLSSLARQSHTSGEIVNYMAIDVQRVGDYAWYLHDMWMLPLQIVLALAILYKNVGIASVATLVATIISIVITVPVARIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIRLEEMRGVEYKWLKKALYSQAFITFMFWSSPIFVSAVTFATSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLSCFLLEEELQEDATTVLPQGVSNIAIEIKDSEFSWDPSSSSRPTLSEINMKVEKGMRVAVCGTVGSGKSSFLSCILGEIPKLSGEVSVCGSAAYVSQSAWIQSGTIEENILFGSPKDKPKYKNVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALANKTVIFVTHQVEFLPAADLILVLKEGCIIQAGKYDDLLQAGTDFKALVSAHHEAIEAMDIPSHSSEDSDENLSLEASVMTSKKSICSANDIDSLTKEMQDGPSASDQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDQPKVKPMILLLVYIALAFGSTWFIFVRAVLVATFGLAAAQKLFLKMLRCVFHAPMYFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFAATTIQLIGIVGVMTEVTWQVLLLVIPMAIACLWMQKYYMASSRELVRIVSIQKSPIINLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPRGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIIEDSRPPSSWPVNGTIEIFDLKVRYKENLPLVLHGVSCTFPGGKNIGIVGRTGSGKSTLIQALFRLIEPAGGSIHIDNINILEIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKDIWEALDKSQLGEIIREKGQKLNTPVIENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRTEFKDCTVLTIAHRIPTVIDSDQVLVLSDGRVAEFDTPLRLLEDKSSMFLKLVTEYSSRSSGVPEF* 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3925 1538 CDD ABC_6TM_ABCC_D1 333 620 IPR044746 GO:0140359
Mal3g3925 1538 CDD ABCC_MRP_domain1 646 846 - -
Mal3g3925 1538 Gene3D - 1275 1528 IPR027417 -
Mal3g3925 1538 CDD ABC_6TM_ABCC_D2 973 1267 IPR044726 GO:0140359
Mal3g3925 1538 Coils Coil 930 950 - -
Mal3g3925 1538 SMART AAA_5 1318 1503 IPR003593 -
Mal3g3925 1538 SMART AAA_5 674 855 IPR003593 -
Mal3g3925 1538 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 83 1538 - -
Mal3g3925 1538 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1292 1526 IPR003439 GO:0005524
Mal3g3925 1538 Pfam ABC transporter transmembrane region 975 1217 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g3925 1538 Pfam ABC transporter transmembrane region 334 600 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g3925 1538 SUPERFAMILY ABC transporter transmembrane region 320 626 IPR036640 GO:0005524|GO:0016021
Mal3g3925 1538 SUPERFAMILY ABC transporter transmembrane region 972 1272 IPR036640 GO:0005524|GO:0016021
Mal3g3925 1538 CDD ABCC_MRP_domain2 1290 1510 - -
Mal3g3925 1538 Pfam ABC transporter 665 799 IPR003439 GO:0005524
Mal3g3925 1538 Gene3D - 641 875 IPR027417 -
Mal3g3925 1538 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 332 612 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g3925 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1282 1521 IPR027417 -
Mal3g3925 1538 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 646 870 IPR003439 GO:0005524
Mal3g3925 1538 Pfam ABC transporter 1309 1457 IPR003439 GO:0005524
Mal3g3925 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 642 869 IPR027417 -
Mal3g3925 1538 ProSitePatterns ABC transporters family signature. 772 786 IPR017871 GO:0005524
Mal3g3925 1538 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 975 1245 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g3925 1538 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 83 1538 - -
Mal3g3925 1538 MobiDBLite consensus disorder prediction 916 944 - -
Mal3g3925 1538 Gene3D ABC transporter type 1, transmembrane domain 300 629 IPR036640 GO:0005524|GO:0016021
Mal3g3925 1538 Gene3D ABC transporter type 1, transmembrane domain 934 1273 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3925 Mal-Chr3 117321805 117328662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3925 617 863 Calmodulin-binding Proteins AT2G36910 30.798 6.87e-22 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3925 3 117321805 117328662 Mal3g3925 3 117321805 117328662 ECH
Mal3g3925 3 117321805 117328662 Mal1g2569 1 35491230 35499347 PCT