Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3922 ATGACAATGAAGAAGAACAAGATGCAGATGAAAACTCAATTTTTCATCTTCTTCTGTTACATTGTCATTTTTTGTTTTTCTTATAGTTTTGCTGCTACCACAAATGATGAAGTATCAGCTTTGCTTTCTATGAAAGAAGGCCTTGTTGATCCTTTGAACATTCTTCAGGATTGGAAATTGGATGCAGCTCATTGTAACTGGACAGGCATCAAATGCAACTTGGCTGGAACTGTAGAGAATCTTGATCTCTCTCACAAGAATCTCAGTGGTATAGTATCCAATGATATACAAAGACTTCAAAATCTTACTTCTCTTAACTTATGTTGCAATGCATTTTCATCACCATTTCCAAAATCTATAGCAAATCTCACCTCACTAAACATTCTTGATGTAAGTCAGAATTTCTTCATTGGTGAATTGCCATTAGGATTTGGAAAGGCGTCGAGACTTACAACGTTAAATACATCAAGTAATGAGTTCACAGGTTCAATTCCTTTGGACATTGGAAATGCAACTTCCTTAGAAATGCTTGATCTTAGAGGCAGTTTCTTTGAAGGTTCAATTCCAAAATCATTCAGCAACTTGCATAAGTTGAAGTTTCTTGGTTTATCGGGGAATAATCTCACTGGAAAAATTCCTGGTGAACTTGGAAATCTTTCATCATTGGAGTATATGATTCTTGGATATAACGAATTCGAAGGTGAGATTCCAGCAGAATTTGGAAATCTCACTAGTCTTAAGTATCTTGATTTAGCAGTAGCAAATCTTGGTGGTGAGATTCCAAATGAATTAGGAAATCTCAAGTTATTGGATACACTTTTCTTATACAACAACAATTTTGAAGGAAGGATTCCATCACAAATTGGCAACATTACTTCTTTGCAGTTTTTGGATCTTTCTGATAACAATTTGTCAGGAAAAATTCCAGATGAAATAAGTCTGCTGAAGAATTTGAAGCTTCTGAACTTCATGGGAAACCAGTTATCTGGTATTGTTCCTTCTGGAATTGGTAATTTTCCTCAACTGGAAGTTCTTGAGCTATGGAATAATTCATTATCAGGTCCATTGCCTAGTAACCTCGGCGAGAATTCACCCTTGCAATGGTTGGATGTATCATCCAATTCACTCTCTGGAGAGATTCCAGAAACTCTTTGCAACAAGGGAAATCTCACCAAGCTAATACTTTTCAACAATGCTTTCTCTGGTACAATTCCATCAAGCCTATCAATGTGTTCTTCGCTTGTTCGTGTTCGAATTCACAACAATTTTCTCTCTGGAAAAGTTCCTGTTGGTCTTGGCAAGCTTGAGAAGCTTCAAAGGTTAGAATTGGCTAACAATAGTCTCACTGGTGAAATTCCAGATGATATTCCTTCTTCCACATCACTTTCTTTCATTGATTTCTCAAGAAACAAACTTCATTCTTCTCTCCCTTCCACCATTCTATCCATTCCAAATCTTCAAGTTTTCAAAGTTTCCAACAATAACTTAGAAGGGAAAATTCCAGAACAATTTCAGGACTCTCCTTCACTCACTGTTCTTGATCTCTCATCGAATCATTTGTCCGGAACCATTCCAGATAGTATAGGTTCATGTCAAAAATTAGTAAATTTGAACCTGCAAAATAACCTTTTGATTGGTAAAATCCCAAAAGCATTAGCTAACATGCCTACAATGGCGATGCTTGATCTTTCAAACAATTCTTTGACTGGTCATATACCTGAAAACTTTGGTGTATCTCCAGCTCTTGAAGCATTTAATGTCTCATACAACAAGCTTGAAGGTTCTGTGCCAGAAAATGGTATGCTAAGAACTATAAACCCGAATAATCTCATCGGCAATGCTGGCCTATGTGGTGGTGCCCTCCTTTCATGTGATCAAAACTCAGCGTACTCCTCAAGGCATGGAAGTTCACATGAAAAACACATTATCACAGGATGGATCATTGGAATATCATCAATTCTAGCCATTGGAATTACCATTTTGGTGGTAAAATCTTTATATGTAAAGTGGTACACTGGTGGTTTTTGCTTCAGAGAGAGATTTTATAAAGGGAGCAAAGGGTGGCCGTGGAGATTGATGGCATTTCAGAGACTTGGTTTTACAAGTACAGACATTCTAGCTTGTATCAAAGAAACAAATGTGATCGGAATGGGAGGTACCGGCGTTGTTTACAAGGCCGAGGTACCGCAATCTAATACAGTTGTGGCAGTGAAAAAGTTGTGGAGATCAGGAAATGATGTTGAAGTAGGTGGAGGAGGAAGTGATGAGCTTGTTGGAGAGGTGAATCTTTTAGGGAGACTAAGGCATAGGAACATTGTTAGACTATTAGGATTTCTTCATAATGACATTGATTTGATGATAGTTTATGAATTTATGCCTAATGGAAATCTTGGAGATGCCTTGCATGGTAGGCAAGAAGTTAGACAACTTGTGGATTGGGTTTCAAGATATAACATAGCTTTAGGAGTTGCTCAAGGACTTGCTTATCTTCACCATGACTGTCATCCGCCGGTTATTCATCGCGACATCAAGTCAAATAATATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTCGGATTAGCCAAGATGATGATCCATAAGAACGAAACAGTCTCCATGGTTGCTGGATCCTATGGCTACATTGCTCCTGAATATGGATATGCATTGAAGGTGGATGAAAAGATTGATGTATACAGTTATGGAGTAGTTTTATTGGAGCTTGTCACAGGAAAGAGGCCATTAGATTCAGAGTTTGGAGAGAGTGTAGACATTGTAGAGTGGATTAGAAGGAAAATTAGAGACAACAGATCTCTAGAAGAAGCATTAGATCCAATTGTAGGAAACTGCAGGCATGTCATTGAAGAGATGCTTCTAGTTTTAAGAATAGCAGTTGTTTGCACTGCTAAGCTTCCCAAGGAAAGACCAAGCATGAGGGATGTTATAATGATGCTTGGAGAGGCAAAGCCAAGAAGAAAGACCAGTGGCAACAATGAAACATCTTTAGCAGCTAACAACATTAATAACAAGGAGATGTCAGTTTTTAGCACATCACCAGTTAGTGGTCTTCTCTAG 3081 0.3801 MTMKKNKMQMKTQFFIFFCYIVIFCFSYSFAATTNDEVSALLSMKEGLVDPLNILQDWKLDAAHCNWTGIKCNLAGTVENLDLSHKNLSGIVSNDIQRLQNLTSLNLCCNAFSSPFPKSIANLTSLNILDVSQNFFIGELPLGFGKASRLTTLNTSSNEFTGSIPLDIGNATSLEMLDLRGSFFEGSIPKSFSNLHKLKFLGLSGNNLTGKIPGELGNLSSLEYMILGYNEFEGEIPAEFGNLTSLKYLDLAVANLGGEIPNELGNLKLLDTLFLYNNNFEGRIPSQIGNITSLQFLDLSDNNLSGKIPDEISLLKNLKLLNFMGNQLSGIVPSGIGNFPQLEVLELWNNSLSGPLPSNLGENSPLQWLDVSSNSLSGEIPETLCNKGNLTKLILFNNAFSGTIPSSLSMCSSLVRVRIHNNFLSGKVPVGLGKLEKLQRLELANNSLTGEIPDDIPSSTSLSFIDFSRNKLHSSLPSTILSIPNLQVFKVSNNNLEGKIPEQFQDSPSLTVLDLSSNHLSGTIPDSIGSCQKLVNLNLQNNLLIGKIPKALANMPTMAMLDLSNNSLTGHIPENFGVSPALEAFNVSYNKLEGSVPENGMLRTINPNNLIGNAGLCGGALLSCDQNSAYSSRHGSSHEKHIITGWIIGISSILAIGITILVVKSLYVKWYTGGFCFRERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGGTGVVYKAEVPQSNTVVAVKKLWRSGNDVEVGGGGSDELVGEVNLLGRLRHRNIVRLLGFLHNDIDLMIVYEFMPNGNLGDALHGRQEVRQLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIHKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELVTGKRPLDSEFGESVDIVEWIRRKIRDNRSLEEALDPIVGNCRHVIEEMLLVLRIAVVCTAKLPKERPSMRDVIMMLGEAKPRRKTSGNNETSLAANNINNKEMSVFSTSPVSGLL* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3922 1026 Pfam Leucine Rich Repeat 293 312 IPR001611 GO:0005515
Mal3g3922 1026 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Mal3g3922 1026 Gene3D Ribonuclease Inhibitor 286 383 IPR032675 -
Mal3g3922 1026 Gene3D Ribonuclease Inhibitor 182 285 IPR032675 -
Mal3g3922 1026 SMART serkin_6 709 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3922 1026 Pfam Protein kinase domain 711 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3922 1026 ProSitePatterns Protein kinases ATP-binding region signature. 715 739 IPR017441 GO:0005524
Mal3g3922 1026 SUPERFAMILY L domain-like 59 354 - -
Mal3g3922 1026 Gene3D Phosphorylase Kinase; domain 1 701 791 - -
Mal3g3922 1026 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 999 - -
Mal3g3922 1026 Gene3D Transferase(Phosphotransferase) domain 1 792 1014 - -
Mal3g3922 1026 Gene3D Ribonuclease Inhibitor 33 181 IPR032675 -
Mal3g3922 1026 SUPERFAMILY RNI-like 256 601 - -
Mal3g3922 1026 ProSiteProfiles Protein kinase domain profile. 709 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3922 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Mal3g3922 1026 SUPERFAMILY Protein kinase-like (PK-like) 705 987 IPR011009 -
Mal3g3922 1026 ProSiteProfiles Leucine-rich repeat profile. 509 531 IPR001611 GO:0005515
Mal3g3922 1026 SMART LRR_typ_2 483 506 IPR003591 -
Mal3g3922 1026 SMART LRR_typ_2 243 267 IPR003591 -
Mal3g3922 1026 SMART LRR_typ_2 435 459 IPR003591 -
Mal3g3922 1026 SMART LRR_typ_2 339 363 IPR003591 -
Mal3g3922 1026 SMART LRR_typ_2 291 315 IPR003591 -
Mal3g3922 1026 SMART LRR_typ_2 508 531 IPR003591 -
Mal3g3922 1026 SMART LRR_typ_2 195 219 IPR003591 -
Mal3g3922 1026 Gene3D Ribonuclease Inhibitor 384 625 IPR032675 -
Mal3g3922 1026 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Mal3g3922 1026 PANTHER UNNAMED PRODUCT 11 999 - -
Mal3g3922 1026 Pfam Leucine rich repeat 484 544 IPR001611 GO:0005515
Mal3g3922 1026 Pfam Leucine rich repeat 173 231 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3922 Mal-Chr3 117296495 117299975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3922 8 1026 Receptor kinase-like Gene Family AT1G08590 58.213 0.0 1154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal3g3922 Pkinase 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3922 - - gmx:100789665 1657.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3922 3 117296495 117299975 Mal3g3922 3 117296495 117299975 ECH