Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3901 ATGTCTAAGAGAGGTCGTGGTGGATCTGCAGGTAACAAATTCAGGATGTCACTCGGTTTGCCGGTGGCGGCGACGGTGAACTGCGCCGATAACACCGGTGCTAAGAATCTTTACACCATCGGTGTCAAAGGTGTCGCTGGAAGGTTGAACCGTTTGCCGTCGGCTTGCATTGGTGACATGGTGATGGCTACCGTCAAGAAGGGAAAACCTGATCTTCGTAAGAAGGTGCTTCCTGCCGTCATTGTTCGTCAGCGCAAACAGTGGCGCCGTAAGAACGGTGAATTCATGTACTTTGAAGATAATGCTGGTGTTATTGTGAACCCCAAAGGTGAAATGAAAGGGTCTGCTATCACTGGACCAATTGGGAAGGAGTGTGCTGATTTGTGGCCTAGGATTGCAAGTGCTGCGAATGCTATTGTTTAA 423 0.4941 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYTIGVKGVAGRLNRLPSACIGDMVMATVKKGKPDLRKKVLPAVIVRQRKQWRRKNGEFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3901 140 Pfam Ribosomal protein L14p/L23e 22 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mal3g3901 140 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mal3g3901 140 PANTHER 60S RIBOSOMAL PROTEIN L23 1 140 - -
Mal3g3901 140 Gene3D Ribosomal protein L14 1 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Mal3g3901 140 SMART Ribosomal_L14_2 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mal3g3901 140 Hamap 50S ribosomal protein L14 [rplN]. 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mal3g3901 140 SUPERFAMILY Ribosomal protein L14 11 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Mal3g3901 140 ProSitePatterns Ribosomal protein L14 signature. 79 105 IPR019972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3901 Mal-Chr3 116971174 116972322 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3901 1 140 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 92.857 5.68e-94 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3901 K02894 - zju:107434236 270.011