Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3897 ATGGAAGCCCGTCCTGCTTTCTCAATTGAAAGATCAAGTGCCAAGCAACTGAATAACATAGGGATGTCTGGAGCACTTCCTTCATCGTTGTCTGTCCATCCAACACCCCTAGAGGAGACATACCCCAGATTTTCTGATTCGCAGCCGACTTTTGTGGAAAAAGATCTGAAGACAAAAACTTTTAATCATTCAAGTCATATAAGTTCCAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATATTCAACCGATCTTCATCACTCATCCCTTTCACCTCATGAAAAACACTCTAGAAGTGCTCATTTTATTTCACAGTCATTGAGTAACATGGCTTCAGTGCCATTACCGTATTCTTCAAATAATGGAGCGGTACCTTCTACAACATCAACACATTATTCCAATGGAAACAGTGCTTCATGGTATGCAGATCCCCTGCCTAGTTTTCTTGATTTCTCTGCAAATGCCTCAGTTGATAATAACCAAGTAGAGAGTGGTGCCTGCAATATTACGGCTACTGAGGAGTTTTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGACGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGGCGGTGGAATCCATTTCAAAGTCATCTTCACAATTTTCGGCGGGACACCAATCCCAAGGCCACCAACAACTTCCAGCTCTATCTGGAGAAAACCATGTTGGTGTCGCTCCATCTTCCTCAGCAAATTCTGCAACAGCCAAGCCACGTATGCGTTGGACTCCTGAGCTTCACGAGGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGTGCTGGAGAGAAAAAACTAAGCCCCATTGAAGATATTTCATCTCTAGATTTGAAAACTGGTATTGAGATTACGGAAGCTCTGCGACTGCAGATGGAGGTCCAGAAACGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAGCAAGGCAGGTACCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGTTGAACCATTTAAGGCATCATCGTCAGCCATCGAGAATCCATCTGGAGTGTCTTCTGACACCATAAAAGACTCTCCTACCAAAAATGAATTGGAAGCATCCAAAATGGACCATTGCAGGTCAGGACCTGATCAAGCTAATGGTAGTACCATAGTTGAGGAAAGCTCGCTAGAAGCGGTTGAGAAGCAGGATACCTCCAAAGCCCAACATGCTTCTGAGGATCTTGAGCAAAAGGAAAATGAAGATAGCGCTCAAGCCCCTAAGCGTCCAAGGACACATGACTAA 1470 0.4367 MEARPAFSIERSSAKQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTFVEKDLKTKTFNHSSHISSSGAVGHMFSSSPGYSTDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLPYSSNNGAVPSTTSTHYSNGNSASWYADPLPSFLDFSANASVDNNQVESGACNITATEEFSKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKAVESISKSSSQFSAGHQSQGHQQLPALSGENHVGVAPSSSANSATAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAGEKKLSPIEDISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDTIKDSPTKNELEASKMDHCRSGPDQANGSTIVEESSLEAVEKQDTSKAQHASEDLEQKENEDSAQAPKRPRTHD* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3897 489 MobiDBLite consensus disorder prediction 452 489 - -
Mal3g3897 489 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 61 488 IPR044848 GO:0003700
Mal3g3897 489 SUPERFAMILY Homeodomain-like 261 316 IPR009057 -
Mal3g3897 489 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 262 316 IPR006447 GO:0003677
Mal3g3897 489 Coils Coil 350 370 - -
Mal3g3897 489 MobiDBLite consensus disorder prediction 84 103 - -
Mal3g3897 489 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 266 319 IPR017930 -
Mal3g3897 489 Pfam MYB-CC type transfactor, LHEQLE motif 347 394 IPR025756 -
Mal3g3897 489 MobiDBLite consensus disorder prediction 244 263 - -
Mal3g3897 489 MobiDBLite consensus disorder prediction 399 419 - -
Mal3g3897 489 MobiDBLite consensus disorder prediction 248 262 - -
Mal3g3897 489 Pfam Myb-like DNA-binding domain 264 315 IPR001005 -
Mal3g3897 489 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 61 488 - -
Mal3g3897 489 MobiDBLite consensus disorder prediction 399 489 - -
Mal3g3897 489 Gene3D - 261 320 - -
Mal3g3897 489 MobiDBLite consensus disorder prediction 420 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3897 Mal-Chr3 116949231 116954646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3897 1 404 G2-like Transcription Factor Family AT4G28610 50.732 4.72e-112 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal3g3897 Myb_DNA-binding 9.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3897 - - gmx:100810560 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3897 3 116949231 116954646 Mal3g3897 3 116949231 116954646 ECH
Mal3g3897 3 116949231 116954646 Mal1g1311 1 16780819 16783393 PCT