Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3870 ATGGATCATGTGATTGCTGGGAAGTTTAAGTTGGGAAGGAAAATTGGAAGTGGGTCTTTTGGGGAGCTTTATATAGCTGTTAATGTACAAACTGGGGAGGAGGTTGCTGTCAAGCTGGAGCCAGTGAAGACCAAGCATCCACAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACAGGGGTGCCTCACCTGAAGTGGTTTGGAGTTGAGGGAGAATACAATGTGATGGCAATTGATCTTCTTGGACCCAGTCTGGAAGATCTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGTCGGTGTTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCATCGTGACATAAAGCCAGACAATTTTTTAATGGGCCTAGGACGTAAAGCAAACCAGGTCTACATTATTGACTATGGTCTCGCCAAAAAATTCAGAGATCTTCAGACTCATAAGCACATACCTTACAGGGAAAACAAAAACCTTACAGGCACAGCTCGGTACGCGAGCGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGAGATGATCTGGAATCTCTTGGTTATGTTCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGATTGAAGGCGGGCACCAAAAAACAAAAATATGATAAAATCAGTGAGAAGAAGATGACAACTTCCATAGAGGTGCTCTGCAAATCACATCCGTCAGAGTTTGTATCATACTTTCACTACTGCCGATCATTGCGGTTTGAAGACAAGCCTGACTATTCATATTTGAAAAGACTTTTTCGAGATCTATTTATTCGAGAAGGCTATCAATTCGACTATGTTTTTGACTGGACTATATTGAAGTATCCGCAGATTAGTGGCAGCAGCTCCAGAGGGCGGCAGGACAGTGGCAAGGCGGCTATGAATGCGGGGCCATCAGTACAGAGGCCAGAAAAGTTATCAGTTGGGAAAGAGCTTCGAGAGAGATTCACCGGTGCTGTTGAAGCATTCTCGCGGAGGAACCCAACAAGTTCTAGTCCTCGCCGTGAGCACTCCAAACACAGGAGTTTTGAGGATGTAGCAGCCATGCACAAGGATGCGTATCATGATCAAGACAAGGGACGCAATTCCGGTCGATATGGTAGCAGTTCAAGAAGACCGATAATCTCATCATCAACCAAGCCAAGTTCCTCAGGTGATCATACTGACAGTCGTACTGGCCGGCTGACATCATCTGGTAGCCGTCCATCTACCGCGCATAGAGTTCAACCTGTGTATGAGACCAAACAGCCAACCTACACACGCTCGGGATCTACTAGAGGCAACCACGATGATACTTTGCGGAGTTTTGAACTCCTTTCTATCAGGAAGTAA 1392 0.4447 MDHVIAGKFKLGRKIGSGSFGELYIAVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGVPHLKWFGVEGEYNVMAIDLLGPSLEDLFNYCNRKLTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKFRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMTTSIEVLCKSHPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQISGSSSRGRQDSGKAAMNAGPSVQRPEKLSVGKELRERFTGAVEAFSRRNPTSSSPRREHSKHRSFEDVAAMHKDAYHDQDKGRNSGRYGSSSRRPIISSSTKPSSSGDHTDSRTGRLTSSGSRPSTAHRVQPVYETKQPTYTRSGSTRGNHDDTLRSFELLSIRK* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3870 463 MobiDBLite consensus disorder prediction 300 463 - -
Mal3g3870 463 Gene3D Transferase(Phosphotransferase) domain 1 1 334 - -
Mal3g3870 463 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3870 463 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mal3g3870 463 MobiDBLite consensus disorder prediction 383 446 - -
Mal3g3870 463 PANTHER CASEIN KINASE-RELATED 1 452 - -
Mal3g3870 463 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3870 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mal3g3870 463 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3870 463 MobiDBLite consensus disorder prediction 447 463 - -
Mal3g3870 463 MobiDBLite consensus disorder prediction 350 382 - -
Mal3g3870 463 MobiDBLite consensus disorder prediction 326 340 - -
Mal3g3870 463 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Mal3g3870 463 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 452 - -
Mal3g3870 463 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3870 Mal-Chr3 116596091 116600828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3870 6 227 CBL-interacting serine-threonine protein kinases AT4G24400 28.821 1.52e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mal3g3870 Pkinase 9.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3870 K08960 - cam:101493293 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3870 3 116596091 116600828 Mal3g3870 3 116596091 116600828 ECH
Mal3g3870 3 116596091 116600828 Mal1g2534 1 35056029 35061863 PCT