Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3869 ATGGATTCGGCGAGGAGTTGGTTTCAAAAGTTTCAACCGCGAGATAAACTGAGAGCTTCAACAAGGAAGAAGGATGATGGTAATGGCGGAATAGATGATTGTAATGTGGTTATTGATGATGTCGATCATTCAAGCGTTACCAAGCAGAAGGTTGCTGCTGCTAAGCAATACATTGAGAATCATTATAAGGAACAAATGAAGAGTCTTCAAGAGAGGAAAGAACGCCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGATCAAAACAACCTACTTAAATTTTTGGAGAAGAAGGAAACTGAATACATGCGTCTTCAGAGACATAAAATGGGTGTTGAGGATTTTGAGATGTTGACTATGATTGGAAAAGGTGCATTTGGGGAGGTTAGAGTCTGTAGGGAAAAGACTACAGATCATGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTCCGAAGAGGCCAGGTAGAGCATGTCAGATCTGAGAGGAATCTCCTTGCAGAGGTTGATAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAGGATGATGACTATCTATATCTTATTATGGAGTATCTACCGGGAGGCGATATGATGACTCTTCTTATGAGAAAGGATACACTGACTGAAGACGAAGCCCAGTTTTATGTAGGAGAAACGGTTCTGGCTATTGAATCTATTCATAAACATAATTATATACATAGGGATATTAAGCCTGATAACTTATTACTTGATAAATATGGACACTTGAAACTATCCGATTTTGGACTATGTAAGCCGTTAGACTGTAGTACACTTGAAGAAGCAGACTTTTCTATTGGTCAAAATGCAAATGGAACTACACAGAATGATGACCGCGCATGTCCGAAACGCACACAACAAGAACAATTGGAAAATTGGCAGAAAAACAGGAGGACACTTGCTTATTCTACCGTTGGTACACCAGATTATATTGCTCCGGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCCATTATGTATGAAATGTTGGTGGGATATCCGCCTTTTTATTCTGATGATCCAATGTCAACATGTAGGAAGATAGTAAACTGGAAGTCTCACTTGAAATTTCCTGAAGAAGCAAGGTTATCTCCGGAGGCCAAAGATCTTATAAGTAAGCTTTTGTGTAATGTCAATCAGAGACTGGGGTCAAATGGTGCAGTTGAAATAAAGTCTCATCCATTCTTTGAAGGTGTTCAATGGGAAAAGTTGTATCAAATGGAAGCTGCATTTACTCCTGAAGTCAATGATGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGTCTGACAGTCAAACACATTCATCATCAAGATCTGGTCCGTGGAGAAAGATGCTTTCATCTAAGGACATAAATTTTGTGGGATACACATACAAGAACTTTGAAATTGTTAACGACTATCAAGTTCCTGGGATGGCTGAGCTGAAGAAAACCTCCAAATCAAAGAAGCCATCTGTCAAGTCGCTGTTTGATGGTGAGTCAGAGACTTCTGATATTTCAGAAGTGTCTCCAAGCAATCCACCTACTCAATGA 1602 0.392 MDSARSWFQKFQPRDKLRASTRKKDDGNGGIDDCNVVIDDVDHSSVTKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVEDFEMLTMIGKGAFGEVRVCREKTTDHVYAMKKLKKSEMLRRGQVEHVRSERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEDEAQFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLKLSDFGLCKPLDCSTLEEADFSIGQNANGTTQNDDRACPKRTQQEQLENWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVNQRLGSNGAVEIKSHPFFEGVQWEKLYQMEAAFTPEVNDELDTQNFEKFEESDSQTHSSSRSGPWRKMLSSKDINFVGYTYKNFEIVNDYQVPGMAELKKTSKSKKPSVKSLFDGESETSDISEVSPSNPPTQ* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3869 533 SUPERFAMILY Protein kinase-like (PK-like) 93 472 IPR011009 -
Mal3g3869 533 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal3g3869 533 MobiDBLite consensus disorder prediction 9 29 - -
Mal3g3869 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Mal3g3869 533 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 521 - -
Mal3g3869 533 MobiDBLite consensus disorder prediction 513 533 - -
Mal3g3869 533 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3869 533 Gene3D Transferase(Phosphotransferase) domain 1 204 436 - -
Mal3g3869 533 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal3g3869 533 MobiDBLite consensus disorder prediction 499 533 - -
Mal3g3869 533 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3869 533 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3869 533 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Mal3g3869 533 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mal3g3869 533 CDD STKc_NDR_like 118 482 - -
Mal3g3869 533 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 521 - -
Mal3g3869 533 MobiDBLite consensus disorder prediction 1 29 - -
Mal3g3869 533 Gene3D Phosphorylase Kinase; domain 1 118 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3869 Mal-Chr3 116587698 116592782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3869 1 513 AGC Kinase Gene Family AT2G20470 79.730 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mal3g3869 Pkinase 3.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3869 K08790 - gmx:100783286 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3869 3 116587698 116592782 Mal3g3869 3 116587698 116592782 ECH
Mal3g3869 3 116587698 116592782 Mal1g4282 1 97420218 97425384 PCT
Mal1g2532 1 35019653 35029189 Mal3g3869 3 116587698 116592782 PCT