Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3864 ATGAGATATTCTTCAATTCCGCCTGGTTTTGCATCCCTAACATCTTTTTATCTGACAAGGGATGACAAGCTTAAGAAAACCGATACATCAGACCCAATCCCCACAGCGACTAAACCTGAGATGGATGACAATACTTCATATAACCAGATTTATACACTACGGCCATGGATAATATCCGACCAGAGCAAGCCCAAACCTGAGGAATCTCACAAAGAGCATCTTCCTACGGATAAGTTGAAACCCCCTACAAATTCTTCTCATCCAAAAGGGACGAAATATGGATGTCGAAAATGCAGTAATTGTTTTAAGGTAACAGCAAGGTGGCATCCTGAGGATGCAAGAAGAGAAGTTCTGGAAGAAGCTCCTATTTTCCATCCAACAGAAGAGGAATTCAAAGACACACTTAAATATATTGCAAGCATACGTTCCAGAGCGGAACCTTATGGAATTTGCCGTATTGTCCCTCCTACTAGCTGGAAACTGCCATGTACTCTTGAAAAAAAGAATGTATGGGAAAACTCTGAATTTGTTGCTCAAATTCAGCGAATTGATGGGCACCAAGTTCAGCATGCACCAGAAGTTATGGGTAGCTCTCGTGATAATACAGAAACCAAGAGAAGAAAAGTGATGAAAGTAGCCACGGACCCTCATCTTGGTAATAGAAGCACTTGCGCCCCTAATAACGGGAATGTTGGAGGCTGTGACAATGAGCCTGAACCTGGTCCTAAATTCAGTCTCAAAACATTTAAGAAATTGGCAGATGAATTCAAGATCCAGTACTTCAACTACAAGGATAAGAATATGATTATGGGTTCTGATAAAAGTTCAGCCATACATCAACAGCAGTGGGAGCCATCTGTTGAGAATATTGAGGGTGAATACGGACGGATAGTTCAAAATCCAACTGAACAAATTGAGGTTCTCTGTGGTGAAACTTCAGAGGCTGGAGACTTTAGCAGTGGATTTCCAATTACAACGGTTTCTGATCCTCTGAAGGCAGACACTTGCCCTGAATATTTGAAATCTGGATGGAACTTAAATAATATGATTTCACTCCCAGGTTCTCTTATTTCTTTTGAAAGCCCTGAAGCTGCACATAAATTTTCCCCTAGGGTACATGTGGGAATGTGCTTTTCTCCACTCAAATGGAAAGTCGAAGAGCACCAATTATACTCATTATGTTACATGCATTTGGGTGAACCCAGAGTATGGTATAGTGTCCCAGGAAGATCTACTGTTGACTTTGAAACTATTTGGAAGAAGTATCTCCAAGATATTTATGCAGGACAGCCTGATTTGCATGATAATGTGGTTATGCAGTTATCCTGCTCAGTATTGAAGGGAGAGGGTATACCAGTATATCGGTGTGTTCAGTATCCTCGTGAGTTTGTTATTGTCTTTCCTGGAGCATATCATTCAGGATTTGATTGTGGTTTCAACTGTTCTGAGGCAGCAAGTTTTGCTCCTCTTGAGTGGTTGCCTCATGGACAGAATGTTGTAGACCGATATAGTGAACAAAGGAGAAAGACTTTAATTTCATACGACAAGCTGTTACTGGGAGCAGCAAGGGAAGCTGTGAGGGCTCGATGGGAAGCTGATATATGTATGAAGAGTACACCCGACAACTTAACATGTAAAGATGCCTATCAAAGAAATGGGATCTTAGCAAAAGCTTTGAATGCTCGCATCAGGAGTGAAAGTTTGAAGAGAAAATTTATTGCTACTTCTTTTAAGTCACAAAAGATTGATGAAAACTTTAATGCCAGTATTAAAAGGGAATGTAGCGTATGTCTGCGTGATTTATTCCTGTCTGCTGTTGGTTGTTCGTGCTCAGATGACAAGTTTGTGTGTCTTGATCATGCAAAACAGCTTTGTTCTTGCCCTTGGACAAGCAAAATTCTCCTTTACCGTTATGAAATCAGTGATTTAGAGGTTCTTCATCAAGCTTTGGATGGGAAACTAAGTGCAGTCTATAAATGGGCCAAAGAGGATCTTGGTTTAACTGTGCGCTCAGTTGCCTCCAAGAGATCAAAACAAACCCCAGAAAAAGTAAATGATTCAGAAGATTTGATGAAAGAACCTATGTCGCAGTCTGCACGAGATGCATACAACAGGTGGAAACAGCGTAAATCGCAGGCAACACCAAATGCTTTGGTGGGGAAACAGAGCGAAATGGCCTTCCAAGCCAAGCGGACCCCTAGTAGCACTCACAGTAGTTTGCATGCCATTCGTCCAAAAGAGAACACAACTTTACTTCATTCAGAAGTATCAAATGAGGTCAAAGCTAAAGAGAAAATGGTGGGGCACAATTCTGCTGCAAGAAGCATTGGTGAAGGAAGTAATTCTGCTGGGATCAAACCTGATAGCAAGGCAATTGGGGATAAGGTCACAATTTCAAAGAAAGTAGGAGACCCAAAAGTTTCTGAAGCTTCTTCAACTCCAGGCTCGCGTTTCTTGTCTTTACTACAAGAAAACATTTGGATTGATGTTTCGTCTAGTTCTTCAGAATCCGATGAGGAGTAG 2523 0.413 MRYSSIPPGFASLTSFYLTRDDKLKKTDTSDPIPTATKPEMDDNTSYNQIYTLRPWIISDQSKPKPEESHKEHLPTDKLKPPTNSSHPKGTKYGCRKCSNCFKVTARWHPEDARREVLEEAPIFHPTEEEFKDTLKYIASIRSRAEPYGICRIVPPTSWKLPCTLEKKNVWENSEFVAQIQRIDGHQVQHAPEVMGSSRDNTETKRRKVMKVATDPHLGNRSTCAPNNGNVGGCDNEPEPGPKFSLKTFKKLADEFKIQYFNYKDKNMIMGSDKSSAIHQQQWEPSVENIEGEYGRIVQNPTEQIEVLCGETSEAGDFSSGFPITTVSDPLKADTCPEYLKSGWNLNNMISLPGSLISFESPEAAHKFSPRVHVGMCFSPLKWKVEEHQLYSLCYMHLGEPRVWYSVPGRSTVDFETIWKKYLQDIYAGQPDLHDNVVMQLSCSVLKGEGIPVYRCVQYPREFVIVFPGAYHSGFDCGFNCSEAASFAPLEWLPHGQNVVDRYSEQRRKTLISYDKLLLGAAREAVRARWEADICMKSTPDNLTCKDAYQRNGILAKALNARIRSESLKRKFIATSFKSQKIDENFNASIKRECSVCLRDLFLSAVGCSCSDDKFVCLDHAKQLCSCPWTSKILLYRYEISDLEVLHQALDGKLSAVYKWAKEDLGLTVRSVASKRSKQTPEKVNDSEDLMKEPMSQSARDAYNRWKQRKSQATPNALVGKQSEMAFQAKRTPSSTHSSLHAIRPKENTTLLHSEVSNEVKAKEKMVGHNSAARSIGEGSNSAGIKPDSKAIGDKVTISKKVGDPKVSEASSTPGSRFLSLLQENIWIDVSSSSSESDEE* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3864 840 MobiDBLite consensus disorder prediction 61 90 - -
Mal3g3864 840 MobiDBLite consensus disorder prediction 30 45 - -
Mal3g3864 840 MobiDBLite consensus disorder prediction 676 695 - -
Mal3g3864 840 MobiDBLite consensus disorder prediction 24 45 - -
Mal3g3864 840 SMART cupin_9 338 504 IPR003347 -
Mal3g3864 840 ProSiteProfiles JmjN domain profile. 121 162 IPR003349 -
Mal3g3864 840 MobiDBLite consensus disorder prediction 767 815 - -
Mal3g3864 840 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 67 744 - -
Mal3g3864 840 Pfam C5HC2 zinc finger 594 644 IPR004198 -
Mal3g3864 840 MobiDBLite consensus disorder prediction 61 78 - -
Mal3g3864 840 MobiDBLite consensus disorder prediction 674 716 - -
Mal3g3864 840 Pfam jmjN domain 122 155 IPR003349 -
Mal3g3864 840 SMART JmjN_1 120 161 IPR003349 -
Mal3g3864 840 Pfam JmjC domain, hydroxylase 372 487 IPR003347 -
Mal3g3864 840 Gene3D Cupin 106 488 - -
Mal3g3864 840 SUPERFAMILY Clavaminate synthase-like 240 530 - -
Mal3g3864 840 PANTHER LYSINE-SPECIFIC DEMETHYLASE 67 744 - -
Mal3g3864 840 ProSiteProfiles JmjC domain profile. 341 504 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3864 Mal-Chr3 116513635 116520599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3864 5 701 JUMONJI Transcription Factor Family AT1G08620 44.755 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal3g3864 JmjC 8.4e-32 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3864 - - gmx:100804864 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3864 3 116513635 116520599 Mal3g3864 3 116513635 116520599 ECH