Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3859 ATGCATATAGGTCAAATGGATCTAACTTCAGCGAAATGTGTAATCAACAGCATTTCTCGATTCATTCATCTAGTTTCTTGCCAGGCAGTTAAGCCTATGCCCCTTCAGAAGAACTGTAATAATATGGTTGCTGCGTTGAGGTGTTTAAAACCAGTCCTTGATGATGTCGTGGATTACAAAATCCCTGTAGATGACAATCTGTATAGAGAATGTGAAGAATTGGATATGCAGGTTAATGAAGCTAGGGAGTTCGTTGAAAAATGCAGCCCAAAGATGAGCAGGATCCACAGTGTTCTTCAAAGTGGGGAATTATTAATAAAGTTGCAGAGCATTTCAGTTAGGATATGTCACATAATTGATAGATCCTCAAAGTCGAAGTCACCTGCCTCAGTTTTGGATAATCTTCAGCACCGTATACAGGAACTTCAGTCTCTGGAGAAGGAATCAGCTACAGTCTATATAGAAGAAGCACTGAGAAATCAAAAGGATAATACGAAACCTTGCTATGAACGTCTAAGGGAAATTATAGAGCTACTTAAATTGACATCAAACCAGGAGCTTCTGAAAGAAAGTATTGCTGTGGAAAAGGAAAGGTTGAATGCGGAAGTCAACAAAACAAAAGGGGAGTTGGATGAAATTAACCAAATTGTGAATCTTGTGTGCAGTTTACGTGATTATGTGATGAAAACTAAAAGCCCTGAAGTCAAAAGTGGTGTCTCGGTCCCATCATACTTTCGATGCCCTTTATCGCTCGAACTCATGTTAGATCCTGTTATTGTGGCTTCAGGTCAAACATACGAGAGGCAATCCATCCAAACGTGGCTTGATCATGGGCTGAACGTTTGTCCCAAGACTCACCAGAGATTAACTCATGCAAATCTTATTCCCAATTATACTGTTAAAGCTATGATAGCAAATTGGTGTGAAGAAAATAACGTCGAACTTCCTAGTAACTCAAACCAGAGTAATTCTACCCAGAGTTCACCCCCCTCAGATTATCTATTGCATCAAGATTTAGATCGTGTCTGTAGTTTTGGGTCTTCACATAGTAGCAATTCCAATTCAAAATCATCTCTTCAAACTGCAAATTCATTTGAGAAGCAAAAGGGTGATGACTGTTCCAGATTAAGTGATGAATCCAATAGATGTCAGAGTGGTGACACGGAAAAGTTTGAGCAGCAATCTCTTGCTCCTTCGTGTAGTCACAGCAGAAGTGAATCATTTTCAAGTTCTATTTCTAGTACAGATTATGTACCTTCTGTTTCAAAAAAGGTGCCAGTGATATCACATAAGCATCAACCTGCGCTGTTATCTGGAGAAATTACTAATAATGTGTTTCCTGCTTCTCCTGCTTATAAAGAATTCGGGAACTTTCCAACTGTATCACGAGAGCAATTCGAAAGTCCTGGATTAAAAAATGCAACGATGGTGAACGAAAATAAGTACATTAACAATAATAATATTGTTATTACTAGCCATTCAAATTCAAAAGATGATGCCCACCCTGTTTCCAACTCGGAGCATGATAAATTGATCACCGCATCTCATGTCAGTAAGTTGATCGAAGATCTACAGAGTCAATCAAATGAAACACAAGAAGCTGCTGCTGAAGAATTGCGTCTCCTTACCAAGCATAACATGGAAAACCGTGTCATTGTAGGGAAATGTGGGACTATCACGCATTTACTTCCACTGCTATATTCAAACACGAAGATAACACAAGAGCATGCTGTGACAGCTATACTGAACTTGTCAATTAATGAAGACAACAAGACTTTGATTATGGAAGCAGGAGCTATAGAACCACTTATCCATGTTTTGAAGTCAGGAAATAACGGTGCCAAGGAAAATTCTGCTGCTACTCTATTCAGCCTCTCAGTACCAGAAAACAATAAGGCGAAAATTGGTCGTTCCGGTGCTATTAAAGCTTTGGTGGAACTTCTAGCTTCTGGAACTCTTAGGGGGAAGAAAGATGCTGCAACTGCTTTATTTAACTTATCAATATTTCACGAGAATAAAGCTCGGATAGTTCAAGCTGGAGCGGTGAAATTTCTAGTTATGCTATTGGACCCTGCAGATGGAATGGTTGACAAGGCTGTTGCTCTTTTGGCAAACCTATCGACAATCCCAGAGGGTCGGGTAGAAATTGTACGGGAAAGGGGAATCCCCTTATTGGTTGAACTTGTGGAATCAGGTTCTCAGAGGGGAAAGGAAAATGCTGCATCCATTCTCTTGCAACTAAGCCTTCATAGCCGTAAATTTTGTACCCTGATTCTCCAAGAAGGAGCTGTACCTCCCGTAGTTGCATTATCCCAGTTTGGTACGCCAAGAGCAAAGGAAAAGGCACAACAGCTTCTCAGTCATTTTCGTAGTCAGCGTGAAGGAGCTTCCGGGAGGGGAAAATCATGA 2409 0.4035 MHIGQMDLTSAKCVINSISRFIHLVSCQAVKPMPLQKNCNNMVAALRCLKPVLDDVVDYKIPVDDNLYRECEELDMQVNEAREFVEKCSPKMSRIHSVLQSGELLIKLQSISVRICHIIDRSSKSKSPASVLDNLQHRIQELQSLEKESATVYIEEALRNQKDNTKPCYERLREIIELLKLTSNQELLKESIAVEKERLNAEVNKTKGELDEINQIVNLVCSLRDYVMKTKSPEVKSGVSVPSYFRCPLSLELMLDPVIVASGQTYERQSIQTWLDHGLNVCPKTHQRLTHANLIPNYTVKAMIANWCEENNVELPSNSNQSNSTQSSPPSDYLLHQDLDRVCSFGSSHSSNSNSKSSLQTANSFEKQKGDDCSRLSDESNRCQSGDTEKFEQQSLAPSCSHSRSESFSSSISSTDYVPSVSKKVPVISHKHQPALLSGEITNNVFPASPAYKEFGNFPTVSREQFESPGLKNATMVNENKYINNNNIVITSHSNSKDDAHPVSNSEHDKLITASHVSKLIEDLQSQSNETQEAAAEELRLLTKHNMENRVIVGKCGTITHLLPLLYSNTKITQEHAVTAILNLSINEDNKTLIMEAGAIEPLIHVLKSGNNGAKENSAATLFSLSVPENNKAKIGRSGAIKALVELLASGTLRGKKDAATALFNLSIFHENKARIVQAGAVKFLVMLLDPADGMVDKAVALLANLSTIPEGRVEIVRERGIPLLVELVESGSQRGKENAASILLQLSLHSRKFCTLILQEGAVPPVVALSQFGTPRAKEKAQQLLSHFRSQREGASGRGKS* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3859 802 MobiDBLite consensus disorder prediction 387 416 - -
Mal3g3859 802 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 639 681 IPR000225 GO:0005515
Mal3g3859 802 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 11 797 - -
Mal3g3859 802 Coils Coil 189 216 - -
Mal3g3859 802 SMART Ubox_2 244 307 IPR003613 GO:0004842|GO:0016567
Mal3g3859 802 MobiDBLite consensus disorder prediction 368 386 - -
Mal3g3859 802 Gene3D - 472 591 IPR011989 -
Mal3g3859 802 PANTHER U BOX DOMAIN-CONTAINING 11 797 - -
Mal3g3859 802 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 315 IPR013083 -
Mal3g3859 802 MobiDBLite consensus disorder prediction 345 367 - -
Mal3g3859 802 Gene3D - 592 797 IPR011989 -
Mal3g3859 802 Pfam U-box domain 241 312 IPR003613 GO:0004842|GO:0016567
Mal3g3859 802 Pfam Armadillo/beta-catenin-like repeat 587 626 IPR000225 GO:0005515
Mal3g3859 802 Pfam Armadillo/beta-catenin-like repeat 630 667 IPR000225 GO:0005515
Mal3g3859 802 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 598 640 IPR000225 GO:0005515
Mal3g3859 802 Coils Coil 517 541 - -
Mal3g3859 802 SUPERFAMILY RING/U-box 239 315 - -
Mal3g3859 802 ProSiteProfiles U-box domain profile. 240 314 IPR003613 GO:0004842|GO:0016567
Mal3g3859 802 SMART arm_5 669 708 IPR000225 GO:0005515
Mal3g3859 802 SMART arm_5 628 668 IPR000225 GO:0005515
Mal3g3859 802 SMART arm_5 709 749 IPR000225 GO:0005515
Mal3g3859 802 SMART arm_5 587 627 IPR000225 GO:0005515
Mal3g3859 802 SMART arm_5 546 586 IPR000225 GO:0005515
Mal3g3859 802 SUPERFAMILY ARM repeat 511 789 IPR016024 -
Mal3g3859 802 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 557 599 IPR000225 GO:0005515
Mal3g3859 802 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 680 721 IPR000225 GO:0005515
Mal3g3859 802 MobiDBLite consensus disorder prediction 345 416 - -
Mal3g3859 802 CDD RING-Ubox_PUB 245 287 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3859 Mal-Chr3 116412759 116417952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3859 6 802 U-box Gene Family AT3G54790 52.494 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3859 - - mtr:MTR_7g097020 1293.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3859 3 116412759 116417952 Mal3g3859 3 116412759 116417952 ECH