Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3855 ATGGCAAATATTCAAAAGGCTAATACTCTTATCTTTTATATACTAATATTTTTGCTTCCATTGAAAATCACAGCATCACTAAAAACAGAAGCAGAAACTCTTGTCAAATGGAAAAACAATATATCCCCTCCTTTTCCTTCTCCTCTCAACTCATGGTCACTCACCAACCTTATCAACCTTTGCAATTGGGATGCTATTGTTTGTGACAACACCAATACAACTATCTTAAAGATAAACTTGTCTAATGCCAATCTCAGTGGAACACTCACTGACTTGGATTTTGCATCCCTCCCAAACCTCACCCTCCTCAACCTCAATGGCAACAGTTTTGGTGGATCAATACCATCATCGATTGGCAAACTCTCCAAGCTCAATTTCTTAGACTTGGGAAACAATTTATTTGAAGACGCGCTTCCATCTGAGCTAGGCCAGCTAAGGGAACTTCACTATGTTAGTTTTTCCAATAACAATCTCAATGGTACCATTCCCTATCAACTCACTAATCTCCCCAAGGTAACTTATCTTGACTTTGGATCAAACTATTTTGTATCTTCCCTTGACTGGTCTCAATATTCAAACATGCCTTCGTTAAATTACCTTGGTTTGGAGGACAATGAATTCAGTGGTGACATTCCAAGTTTCATACTTGAGTGCAAGAATTTAACATATCTTGACCTCTCTCAAAACACTTGGAATGGTACAATACCAGAATCCATGTATAGTAATATGGGAAAGCTTGAATATCTCAACCTCACCAACTGTGGATTAGAAGGAACACTATCATCTAACATGTCTATGCTCTCGAATCTAAAAGATCTTCGTATCGGTAATAACATGTTTAATAGTTATATTCCAGCAGAGATAAGATTGATATCTAGGCTTCAATTTCTTGAACTAAACAACATTTCAGCTCATGGGGAAATTCCTTCTTCCATAGGTCAACTAAAAGAGCTAGTGCATCTTGATCTTCGTGCTAATTTTTTGAACTCTAAAGTCCCTTATGGGATTGGCCTATGCACAAATCTTACTTTCTTGAGCTTAGCTGTAAATAATCTGACAGGTTCTTTGCCTTTGTCATTAGCAAATTTGACCAAACTATCAGAACTAGGATTATCAGATAATTCCTTTTCTGGTCAAATTTCAGCTTCATTGATCTCTAATTGGACTGAGTTAACTTCTTTGCAAGTCCAAAAAAATAGATTAACAGGAATAGTTCCTCCACAGATTGGTCTGTTGAAAAAAATTACAACTCTTTTCCTCTACAAAAATCTTTTCTCTGGTCCTATTCCTGAAGAGTTTGGAAATTTAAAGGAAATGACAGAGTTAGACCTTTCAGGAAACCATTTCTCTGGTCCTATTCCACCAACCATTTGGAATCTCACAAATATCACAGTCATAAATCTTTTCTTCAACAACCTCTCTGGAAACATTCCAGTGGATATTGGAAACTTAACCTCATTGCAAATTTTTGATGTCAACAATAATAACATGGATGGAGAATTGCCACACACAATTTCTCATCTAACTTCCTTAACTTATTTTTCTGTGTTCACCAATAGCTTCTCAGGTAACATTTCCAGAGATTTTGGAAAGAATAGTCCTTCTTTGACTCATGTCTACTTTTCAAACAATAGTTTCTCAGGAGAACTTCCTTCTGACATGTGCAGTGGCCTAAAACTAGTTGTTTTGGCAGTAAATAACAATAGCTTTTCGGGGCCATTGCCGAAATCTTTGAGAAATTATTCATCTTTTATAAGAGTTAGGCTTGATGACAACAAGTTCAATGGAAACATCACAGAAGCATTTGGGATTCATCCAAATCTAAATTTCATCTCACTTAGCAGAAATCGCTTCGTTGGTTATCTCTCTCCAGATTGGGGTAAATGTATCAGCTTAACTGAGATGGAAATGAGTGGAAACAAACTTTCTGGAAAAATTCCATCTGAGCTAAGTAAGTTGAGTAAATTGCAATTTCTTAGCCTACACTCCAACGAATTCACCGGAAATATCCCACATGAAATTGGAGATATAAGTTTGCTCTTCATGTTGAACTTGAGTAGGAACCATTTGTCAGGTGAAATCCCAAAGAGTATTGGAAGATTATCTGAGCTTAGTGTTGTTGATTTATCTAATAACAACTTCAGAGGAAGCATTCCAAAAGAGATTAGTAATTGTTACCGGTTACTAAGCCTAAATTTAAGCCATAACAATCTTTCTGGCGTGATGCCGTATGAACTAGGCAATCTGTACTCACTTCAATCCTTGTTAGATCTTAGCAGCAACAACCTTTTGGGAGAAATTCCTCAAAATCTTCAAAAGTTAGCATCATTGGAGATCCTCAACGTCTCACACAACAATCTATCTGGAACAATCCCACAATCCTTTTCAAGTATGCCCAGCCTTCAATCTGTAGATTTTTCTTACAACCGCTTGTCAGGTTCGATCCCAACAGGTGGTGTTTTTCAAACAGAAACTGCTGAAGCTTTTGTTGGGAACTCAGGTTTGTGTGGTGAGGTAAAAGGATTAACATGTGCCACAATATTGTCTCAAGAACATTCTGGATGGGCCAACAAAAAGGTACTTCTTGGTGTTACGATACCAGTTGGTGCAGTACTATTTATAGGGATGATTGGTGTTGGAATCCTACTACTTCAAAGGAAAGCCAAAAAACTTAGTGAAGAATCCCAAAGCATTGAAGCTAATGATCAATCTATTTGCATGGTATGGGGAAGAGATGGGAAATTCACATTTTCCGATCTTGTTAAAGCAACCAATGATTTCAACGAAAAGTATTGCATTGGAAAAGGCCGCTTCAGAAGTGTTTATAGAGCAGAACTACCTACAGGTCAAATTGTTGCTGTGAAAAGACTCAATATATCAGACTCCGATGACATTCCAGAAGTGAACCGCACGAGCTTCATGAATGAGATAAGAGCGCTAACAGGAGTGAGGCACCGGAATATAATAAAGCTTTATGGTTTCTGTTCTATGAGGGGACAAATGTTCCTTGTTTATGAACATGTAGAGAAAGGAAGCTTGAGAAAAACGTTGTATGGAGGAGAAGGAAAATTGGAGCTAAGTTGGAGTACAAGGGTGGAAATTGTGCAAGGAATAGCACATGCAATTGCTTACTTGCATAGTGATTGCTCTCCATCAATTGTGCACAGAGATATAACATTGAATAACATACTAGTTGATTCAGATTATGTACCTCATCTTGCAGATTTTGGCACTGCAAAGCTGCTAAGCTCTAACAATTCAACTTGGACCTCAGTTGCTGGATCCTATGGCTACATGGCTCCAGAGCTAGCACAAACTATGAGGGTGACTGAAAAGTGTGATGTGTATAGTTTTGGTGTGGTTGTGCTAGAGATAATGATGGGAAAACACCCTGGAGAATTCTTGGGCACCCTGAATTCGAACAAGTCTTTGACATCAATGGAAGTGCTTGTGAAGGATGTTGTGGATCAAAGGCTTCCACCTCCAACAGGGAAATTAGCTGAAACAATAGTGTTCACAATGACAGTAGCTTTAGCATGCATACGTGCTGCTCCTGAATCTAGACCCATGATGCGTTCTGTTGCACAAGAATTATCTGCTGCTACACAGTCCAGGCTTTCTCAGCCATTTGATATGATAACTATAAGCAAGCTTACAGGATTCCATAAATAG 3672 0.3813 MANIQKANTLIFYILIFLLPLKITASLKTEAETLVKWKNNISPPFPSPLNSWSLTNLINLCNWDAIVCDNTNTTILKINLSNANLSGTLTDLDFASLPNLTLLNLNGNSFGGSIPSSIGKLSKLNFLDLGNNLFEDALPSELGQLRELHYVSFSNNNLNGTIPYQLTNLPKVTYLDFGSNYFVSSLDWSQYSNMPSLNYLGLEDNEFSGDIPSFILECKNLTYLDLSQNTWNGTIPESMYSNMGKLEYLNLTNCGLEGTLSSNMSMLSNLKDLRIGNNMFNSYIPAEIRLISRLQFLELNNISAHGEIPSSIGQLKELVHLDLRANFLNSKVPYGIGLCTNLTFLSLAVNNLTGSLPLSLANLTKLSELGLSDNSFSGQISASLISNWTELTSLQVQKNRLTGIVPPQIGLLKKITTLFLYKNLFSGPIPEEFGNLKEMTELDLSGNHFSGPIPPTIWNLTNITVINLFFNNLSGNIPVDIGNLTSLQIFDVNNNNMDGELPHTISHLTSLTYFSVFTNSFSGNISRDFGKNSPSLTHVYFSNNSFSGELPSDMCSGLKLVVLAVNNNSFSGPLPKSLRNYSSFIRVRLDDNKFNGNITEAFGIHPNLNFISLSRNRFVGYLSPDWGKCISLTEMEMSGNKLSGKIPSELSKLSKLQFLSLHSNEFTGNIPHEIGDISLLFMLNLSRNHLSGEIPKSIGRLSELSVVDLSNNNFRGSIPKEISNCYRLLSLNLSHNNLSGVMPYELGNLYSLQSLLDLSSNNLLGEIPQNLQKLASLEILNVSHNNLSGTIPQSFSSMPSLQSVDFSYNRLSGSIPTGGVFQTETAEAFVGNSGLCGEVKGLTCATILSQEHSGWANKKVLLGVTIPVGAVLFIGMIGVGILLLQRKAKKLSEESQSIEANDQSICMVWGRDGKFTFSDLVKATNDFNEKYCIGKGRFRSVYRAELPTGQIVAVKRLNISDSDDIPEVNRTSFMNEIRALTGVRHRNIIKLYGFCSMRGQMFLVYEHVEKGSLRKTLYGGEGKLELSWSTRVEIVQGIAHAIAYLHSDCSPSIVHRDITLNNILVDSDYVPHLADFGTAKLLSSNNSTWTSVAGSYGYMAPELAQTMRVTEKCDVYSFGVVVLEIMMGKHPGEFLGTLNSNKSLTSMEVLVKDVVDQRLPPPTGKLAETIVFTMTVALACIRAAPESRPMMRSVAQELSAATQSRLSQPFDMITISKLTGFHK* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3855 1223 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Mal3g3855 1223 SMART LRR_typ_2 774 797 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 701 725 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 315 339 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 121 145 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 194 218 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 484 508 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 97 120 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 436 460 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 267 290 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 726 748 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 798 823 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 363 387 IPR003591 -
Mal3g3855 1223 SMART LRR_typ_2 653 677 IPR003591 -
Mal3g3855 1223 Pfam Leucine Rich Repeat 99 121 IPR001611 GO:0005515
Mal3g3855 1223 Gene3D Ribonuclease Inhibitor 27 187 IPR032675 -
Mal3g3855 1223 Pfam Protein kinase domain 929 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 532 1199 - -
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 414 528 - -
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 168 381 - -
Mal3g3855 1223 SUPERFAMILY L domain-like 41 381 - -
Mal3g3855 1223 ProSiteProfiles Protein kinase domain profile. 927 1206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3855 1223 Gene3D Ribonuclease Inhibitor 481 845 IPR032675 -
Mal3g3855 1223 Gene3D Ribonuclease Inhibitor 188 480 IPR032675 -
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 305 416 - -
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 168 381 - -
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 305 416 - -
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 172 - -
Mal3g3855 1223 Gene3D Phosphorylase Kinase; domain 1 886 1007 - -
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 532 1199 - -
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 414 528 - -
Mal3g3855 1223 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 172 - -
Mal3g3855 1223 SUPERFAMILY RNI-like 284 595 - -
Mal3g3855 1223 Pfam Leucine rich repeat 195 256 IPR001611 GO:0005515
Mal3g3855 1223 Pfam Leucine rich repeat 390 449 IPR001611 GO:0005515
Mal3g3855 1223 Pfam Leucine rich repeat 756 811 IPR001611 GO:0005515
Mal3g3855 1223 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1053 1065 IPR008266 GO:0004672|GO:0006468
Mal3g3855 1223 SUPERFAMILY Protein kinase-like (PK-like) 908 1198 IPR011009 -
Mal3g3855 1223 SUPERFAMILY L domain-like 532 823 - -
Mal3g3855 1223 Coils Coil 881 901 - -
Mal3g3855 1223 Gene3D Transferase(Phosphotransferase) domain 1 1008 1214 - -
Mal3g3855 1223 PRINTS Leucine-rich repeat signature 728 741 - -
Mal3g3855 1223 PRINTS Leucine-rich repeat signature 774 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3855 Mal-Chr3 116370251 116392374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3855 1 647 Receptor kinase-like Gene Family AT4G08850 29.926 3.43e-75 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal3g3855 Pkinase 5.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3855 - - gmx:100809137 1764.2