Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3823 ATGATGACTGGTACTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGGAGAAAATGTGTTAGAGGTTGTGTTTTTGCACCTTACTTTTGTCATGAACAAGGTGCTACACATTTTGCAGCTATTCATAAGGTCTTTGGTGCAAGTAATGTCTCAAAGCTTCTTGCACACCTTCCTGTGACTGATCGTTGCGAAGCCGCAGTCACAATTTCGTATGAAGCTCAAGCTAGACTTCAAGATCCAATTTATGGATGTGTTGCTCATATCTTTGCTCTTCAACAACAGGTGGTCAATTTACAAGCACAACTAGCTTATATGAGGGAAGAAGCAGCTCAAAGGTGTTTCAATGCCTCAATTTCTGAAAACCCTAATGAGAAGAATTTTGGAAAACCTACTAATATTCTCCCTCAAGATCTTAAAAGTTGGTTCGAGATCGAAAATTCCAACATAAATCCTCAATTTCTTCCCAACTTGTCCTCCTCCACTAATCTCTCATCAACAACACAATATTATAATGGGAATACTACCACTCTCATGGACCTAAACCCTATAATTGGAAACTATGAAAATTCAGGAACTTTAGAAGAATGCATCTCATCATTTTCTAACTTCGATGAGAGATGTAATAACTCAATGTCCTATGAAAACATGCAAAGGCAGTGGAACTTTCATGAAGTGGATAACCTTCAGTAA 690 0.3841 MMTGTGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVTDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAYMREEAAQRCFNASISENPNEKNFGKPTNILPQDLKSWFEIENSNINPQFLPNLSSSTNLSSTTQYYNGNTTTLMDLNPIIGNYENSGTLEECISSFSNFDERCNNSMSYENMQRQWNFHEVDNLQ* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3823 229 Coils Coil 88 108 - -
Mal3g3823 229 PANTHER LOB DOMAIN CONTAINING PROTEIN 2 225 - -
Mal3g3823 229 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Mal3g3823 229 ProSiteProfiles LOB domain profile. 7 109 IPR004883 -
Mal3g3823 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 2 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3823 Mal-Chr3 116017451 116018603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3823 8 123 AS2 family AT3G58190 78.814 2.25e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal3g3823 LOB 9.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3823 K13945 - gmx:100776678 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3823 3 116017451 116018603 Mal3g3823 3 116017451 116018603 ECH
Mal3g3823 3 116017451 116018603 Mal1g2466 1 33881397 33882366 PCT