Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3822 ATGGCTTCTTCTAATGGAACTAGCTCTGGAACTGGTTCTCCTTGTGGAGCATGCAAGTTCCTAAGAAGAAAATGTGCACCTGATTGCATTTTTGCACCTTACTTTTGCTCAGAACAAGGACCTGCAAGATTTGCAGCCATTCATAAAGTTTTTGGTGCCAGCAATGTTTCTAAGTTGCTTTTGCATATACCAGCTCATGAACGTTGTGAAGCTGTTGTCACAATTGCTTATGAAGCTCAAGCTCGTATTAGAGACCCTGTTTATGGTTGTGTCTCACACATTTTTGCCTTACAACAACAGGTAGCATGCTTACAGGCACAATTGATTCAAGTGAAATCTCAAATGTCACAGAACATAGAGAATAATCTGTGGACAGGAAATAATAATAATGTTTCTGGCACACAACAATTGAATTATCCATTTTGTCCAACTTATATGAACCCTATTTCTCCTCAAAGCTCACTTGAGTCATCAATTGATCATAGCAGCAGCATGAATGATGGAGTGATGAGCATGCAAGATGTACAAAGTAGCAGAGAAGATTTCTCATTCCAAGCTTGTAATAGTTCTAAGAAAAGAATGTCATATAACAACAATAATAATCATCATGACTTGGGTGAGTTGCAAGAAATAGCACTTAGGATGATGAGGAATTGA 657 0.3805 MASSNGTSSGTGSPCGACKFLRRKCAPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHERCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLIQVKSQMSQNIENNLWTGNNNNVSGTQQLNYPFCPTYMNPISPQSSLESSIDHSSSMNDGVMSMQDVQSSREDFSFQACNSSKKRMSYNNNNNHHDLGELQEIALRMMRN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3822 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 217 - -
Mal3g3822 218 Pfam Lateral organ boundaries (LOB) domain 14 112 IPR004883 -
Mal3g3822 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 1 217 - -
Mal3g3822 218 ProSiteProfiles LOB domain profile. 13 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3822 Mal-Chr3 116006694 116007849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3822 1 218 AS2 family AT2G42430 54.217 1.40e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal3g3822 LOB 2.9e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3822 3 116006694 116007849 Mal3g3822 3 116006694 116007849 ECH
Mal3g3822 3 116006694 116007849 Mal1g2463 1 33769564 33771719 PCT