Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3816 ATGGCTGGTGAGAGGTTTTGTAAGAATGAAGAAGACAAGGCTATGTTGGAATCTGTATTGGGTAATGAAGCTTTTGCATTTTTTAGCTCAGCTGTTTCAAAACATGTCTTTTCCGATGTTATTGTTCCGCCGAATCTTGACGTGACTATCCACCAAAGGTTGTGTCACATTGTTAAGGGTTCCAAGTGGAACTACGCGATTTTGTGGCAGGTTGCAGGTTTGAAATCCGGTGGCTATGTGTTGAAATATGGTGAGGGACACTGTCTGGATCCCAAAGGTGGTCCAAGGAATGAGCAGGAAAGGGAGAAAGATGATGTTAGGAGGAAGGTGTTGGGAAAGATTCATGGTTGTTGGGGTGGATCTAGCTCAATTGAAAATATTTATAAGAAATTGGACAGCTTCTCGGATTTATATATGCTTTACTTGATCTCTGTTTATTATGTGTTTGGTTTTAATTCTCAGTATGGTCCTGGTAGTTCTTTTAAGTGTGCTAAACCAAATTGGTCTTCTGATGCTGGTAGTTGTTTAAACCAGTATGAATCGAGGTCGTTTCTGGCTAAATCGGCTGGTTTTCAAACTGTTGCTTTTGTACCTCTCAAGGCCGGGGTTATAGAGCTTGGTTCGACGGAGATGGTGCCTGAAGAGCAAGGTTTTTTGGATATGGTCAGGGCAACATTTGGAGAATTTACCTCTGGACAGGCTAAGGTAGCACCAAAGATTTTTGGGCATGAGTTAAGCTTGGGGGATGCGAAATCTCAGTCCATAACTATAAGTTTCTCCCCAAAAGTGGAAGATGATTCTGGTTTCACTTCTGACTCTTACGAAGTACAAGCGCTTGGAGCGAACCATGCTTATGGTAATTCTTCCAATGGGGGTGTAGGGGACAGTAACGAGGCAAAAATGTACCCTCAGTTGGGTCAAATGATTCCTGGGAATTTTACTTCTCAAGCAAGAGTTTCTTCTATTGATTTGGGTAATGAAGACTGCTCCTCGCCTCTTGGAGACGAGCGGAAGCCTAGAAAAAGAGGGAGAAAGCCTGCCAATGGACGAGAGGAACCACTGAATCATGTTGAAGCGGAGAGGCAAAGACGGGAGAAGCTTAACCAGAGATTTTACGCCTTAAGAGCTGTTGTTCCTAACATTTCTAAAATGGACAAGGCTTCTCTTCTTGGTGATGCTATTACCCATATCACTGATCTCCAGAAGAAGATCAAGCTTATGGAAACTGAAAAAAACATAGCTTACAATAAGGGCCAGCAGGTGCCATTGCAAGATATTGATTTTCAGGCTCGACAGGATGATGCAGTTGTTAGAGTTAGCTGCCCCTTGGATATCCACCCGGTTTCTGGAATTGTTAAAGTGTTCAGAGAGCATCAAATTGTAGCTCAAGAGGCCAATGTTTCAACTGCACAGGATAAAGTTATTCATACATTCTCCATCAGAACTCAAGGAGGGGAAGCAGCTGCTATACAGCTGAAAGAAAAGCTTGAAGCATCTTTAGCCAAAAATTAA 1512 0.4266 MAGERFCKNEEDKAMLESVLGNEAFAFFSSAVSKHVFSDVIVPPNLDVTIHQRLCHIVKGSKWNYAILWQVAGLKSGGYVLKYGEGHCLDPKGGPRNEQEREKDDVRRKVLGKIHGCWGGSSSIENIYKKLDSFSDLYMLYLISVYYVFGFNSQYGPGSSFKCAKPNWSSDAGSCLNQYESRSFLAKSAGFQTVAFVPLKAGVIELGSTEMVPEEQGFLDMVRATFGEFTSGQAKVAPKIFGHELSLGDAKSQSITISFSPKVEDDSGFTSDSYEVQALGANHAYGNSSNGGVGDSNEAKMYPQLGQMIPGNFTSQARVSSIDLGNEDCSSPLGDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITHITDLQKKIKLMETEKNIAYNKGQQVPLQDIDFQARQDDAVVRVSCPLDIHPVSGIVKVFREHQIVAQEANVSTAQDKVIHTFSIRTQGGEAAAIQLKEKLEASLAKN* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3816 503 CDD bHLH_AtAIB_like 348 411 - -
Mal3g3816 503 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 421 IPR036638 GO:0046983
Mal3g3816 503 Coils Coil 397 417 - -
Mal3g3816 503 Gene3D - 344 415 IPR036638 GO:0046983
Mal3g3816 503 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 400 IPR011598 GO:0046983
Mal3g3816 503 Pfam Helix-loop-helix DNA-binding domain 355 401 IPR011598 GO:0046983
Mal3g3816 503 PANTHER TRANSCRIPTION FACTOR BHLH3 3 502 - -
Mal3g3816 503 PANTHER MYC 3 502 IPR045084 GO:0003700|GO:0006355
Mal3g3816 503 MobiDBLite consensus disorder prediction 324 362 - -
Mal3g3816 503 MobiDBLite consensus disorder prediction 330 362 - -
Mal3g3816 503 SMART finulus 357 406 IPR011598 GO:0046983
Mal3g3816 503 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 226 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3816 Mal-Chr3 115863732 115865243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3816 3 502 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 48.024 6.28e-160 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal3g3816 bHLH-MYC_N 5.3e-35 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3816 - - gmx:100819968 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3816 3 115863732 115865243 Mal3g3816 3 115863732 115865243 ECH