Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3802 ATGGAGGTTGTTGTTGTTGGCATGAAGAAGAAGGAGAATATGGGATTTGATGAAACTGAGCTGAGACTTGGAATTGGATTTCCTGGATCAGCCACAGCTACTGATCAAGAATTTGTAAGGAAGAGAGGATTTTCTGAGACTGAAACTGAAGATGAAACAACTATGGATTTGATGCTTAATCTTTCGTCTAAGGAATTTACTTCTGAGGTAGATCCAAGTGATAAGAGCACCAAAACTTTGCAAAAGGAGAAGACCCTTTTGACTGCAGATCCTTCCAAGCCTCCTGCAAAGACGCAAGTGGTGGGTTGGCCACCTGTCCGGTCATACCGGAAGAACATGTTAGCAATGCAAAAGAGTGAAAGTGAGAAGAGCAGTAATCCCAATGCAATTAGCTTTGTGAAAGTTAGCATGGATGGAGCACCTTACCTCCGCAAAGTCGACTTGAAGATGTACACAAGTTACTCACAACTTTCTGATTCCTTAGGCAAAATGTTCAGCTCTTTCACCATTGGCAACTGTGAGTCTCAAGGAATGAAGGATTTCATGAATGAGAGTAAGTTGATGGATCTTTTAAACAATTCTGATTATGTCCCAACCTATGAAGACAAAGATGGTGACTGGATGCTTGTCGGTGACGTCCCATGGGAGATGTTTGTTGAATCATGCAAACGTTTGCGTATCATGAAAGGAAAGGAGGCTATTGGAATTGCACCAAGAGCTATGGAAAAATGCAAGAACAGGATCTAG 747 0.419 MEVVVVGMKKKENMGFDETELRLGIGFPGSATATDQEFVRKRGFSETETEDETTMDLMLNLSSKEFTSEVDPSDKSTKTLQKEKTLLTADPSKPPAKTQVVGWPPVRSYRKNMLAMQKSESEKSSNPNAISFVKVSMDGAPYLRKVDLKMYTSYSQLSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGIAPRAMEKCKNRI* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3802 248 ProSiteProfiles PB1 domain profile. 130 230 IPR000270 GO:0005515
Mal3g3802 248 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 241 IPR003311 GO:0005634|GO:0006355
Mal3g3802 248 PANTHER AUXIN-INDUCED PROTEIN AUX28 5 241 - -
Mal3g3802 248 Pfam AUX/IAA family 18 239 IPR033389 -
Mal3g3802 248 Gene3D - 107 241 - -
Mal3g3802 248 SUPERFAMILY CAD & PB1 domains 120 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3802 Mal-Chr3 115689063 115693417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3802 116 242 B3 DNA Binding Superfamily AT1G30330 29.134 4.76e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal3g3802 AUX_IAA 1.3e-82 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3802 K14484 - gmx:100810013 363.614