Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3801 ATGGGAAGCTATATTGAAACAGAGTTGATTATTAATCACAAGGACACAGAATTGAGGTTGGGATTACCTGGAAGTGAATGTGAACAAAATTCATGCAATGGTGGCTCTATTGTTAGAAGCAACAAAAGATCTTTTTCAACTGAAACAAGTGAAGAAGAAGAAGAAGAAGAGTCCATTTGTAAAAGTAGCAATCATGCTTGTAATTCCTCAACCACAAATGATCATGATGACCAAGACACTGTCCAACCTACAAAGGTACAAGTAGTTGGGTGGCCACCAATTAGATCTTTTAGGAAGAATAGTTTACAACAAAAGAAAGTGGAAGATGGAAATGGAATGTATGTGAAAGTGAGCATGGCTGGTGCACCATACTTGAGAAAGATAGATCTCAAAGTTTACAAGAGCTATTCAGAACTTCTCATAGCTTTGGAGAATTTATTCAAGTGTACATTTGGTGAATATTCAGAAAGAGAAGGGTACAATGAATCTGAATATACTCCTACTTATGAGGACAAGGATGGTGATTGGATGCTAGTTGGAGATGTTCCATGGAACATGTTCATATCCTCATGCAAGAGGCTGAAGATAGTGAAAGGATCAGAGGCAAAGGGGTTGGCATGTTTATGA 627 0.378 MGSYIETELIINHKDTELRLGLPGSECEQNSCNGGSIVRSNKRSFSTETSEEEEEEESICKSSNHACNSSTTNDHDDQDTVQPTKVQVVGWPPIRSFRKNSLQQKKVEDGNGMYVKVSMAGAPYLRKIDLKVYKSYSELLIALENLFKCTFGEYSEREGYNESEYTPTYEDKDGDWMLVGDVPWNMFISSCKRLKIVKGSEAKGLACL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3801 208 PANTHER AUXIN-INDUCED PROTEIN 10 206 - -
Mal3g3801 208 Gene3D - 106 208 - -
Mal3g3801 208 Pfam AUX/IAA family 16 206 IPR033389 -
Mal3g3801 208 MobiDBLite consensus disorder prediction 38 81 - -
Mal3g3801 208 SUPERFAMILY CAD & PB1 domains 106 196 - -
Mal3g3801 208 ProSiteProfiles PB1 domain profile. 112 204 IPR000270 GO:0005515
Mal3g3801 208 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 206 IPR003311 GO:0005634|GO:0006355
Mal3g3801 208 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3801 Mal-Chr3 115673998 115674826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3801 100 205 B3 DNA Binding Superfamily AT2G46530 34.906 1.87e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Mal3g3801 AUX_IAA 1.7e-58 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3801 K14484 - gmx:100792134 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3801 3 115673998 115674826 Mal3g3801 3 115673998 115674826 ECH
Mal3g3801 3 115673998 115674826 Mal1g2415 1 32560977 32562016 PCT