Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal3g3792 | ATGAGTATGGAAAAGAATCCTTGTGTATTTTTTGATGTATCGGTTGATGGAGATCCCGTGGAAAGAATTGTTATTGAGCTTTTTTCTAGCGTAGTTCCTAAGACGGCCGAGAATTTTCGGGCTCTTTGTACAGGTGAGAAGGGGATTGGGGAAGCAACTGGGAAACCCTTGCATTATAAAGGAACATCTTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGCAATGGCACCGGTGGAGAAAGTATATATGGAGGAAAGTTTGCAGATGAAAATTTCAAACTAAAACATGATGGACCTGGTGTCCTGTCTATGGCTAATAGTGGGCCTAACACCAATGGATCTCAGTTTTTTATTATATTCAAGCGCCAGCCGCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTACCAAGGGAATAGAGACTCTGAAGAAAATGGAGCAGTTGGGAACAGCAGACGGGAAGCCTACCCAGCCAATTAAAATTGTTGATTGTGGTGAAGTCTCTAAAGCAAAAAGCGAGCATACAATTGAGAAGGAGAAAGGGAAAAGGAAAAAGTCAACGAAATCCTTAACTTCTGATGATAGTTCTGATGCTGACAAAAAATTTAGCAGAAAAAGAAAAACATCTTCCAAAGATAGGAGGAAGAGAAAGAGGAGATACTCATCATCTGACAGTGACAGTGATAGTCTCTCCTCAGATTCTGAATCAGATTCTGCTTCAGAATCAGATTCGTCGTATTCTGATTCAAGTTCTTCTAGCTATGAGAAGCATAAGAAGAGGAAGAGAAGTAAACACAGGCATGGGAAGAAGAAAAGTATTGGACGGAAGCAGAGAAGAAGCCAGCACAGTCGTAGAAGATCAAAACACAAGTCCAAAAGGAGTTCTGAAGGTTCAAGTGATACCGAAAGTGACAGTTCTAGTGCTAGTGATAAGAAAGCTGGTCGTCTTGTCTCTGGTCGTAAACAACAGGCTGACGACAAAGCTAAAAAAAATCTAGACACAGGAGAGAAGTCTTCTAGCCTTACCTTACAAAGCCCTACCAGTCCAGAATTAGAGGTGGATCCCAAGGTTAGAACGACTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGTGAATTTCTGAATAACGGGCATGATACTCAAACTGAATTTAGTAAACCTTCTAATCAACGAGCTTATTCAGATGATTCAAATCACAACAGAGATGCGAGTCCTGGAAGAAGTCCTACCAAGAATTCTGAGGAGCTGAACCGAGGACGTGCTCTATTGGCTAGTCCTGACCATAAAGCATCTGAACCTGCTGCCTCCAAACATGGCCGGGGCATTTTAAAAAGCCCTTCGCCAAATGGTATGCCAAAGCGCGTTAAAAAAGGACGAGGCTTTACTGAGCGCTTTGCCTTTGTACGCAAATATCGTACTCCATCTCCAGAGCGATCTCCTCGGGCATATCGTTATGGGGATAGAAATGTTAGAAGGAACTTTGATAGAAATACAAGCTACAGAAATTATTCTGAGCGCTCACCACCACGACGTTTTCGAAGCCCACCAAGGGGCAGCCGTCCCAGATACCAAAGCAGAAGAAGTCGAAGTAGGAGCATCTCCCGCAGTCCAGTACGAGGCCGTTATAGAGACAATGTCCGTGGCCGGAGTCCAATACGCAGTGTTAGCCCGGACGGCAGGCGACCTCCCATTAGTGACAGATTAAAATCCCGACTTGGTCGACGAGGTAGTCAACAATCGCCAGACAGAAAGAGGTCAAAGTCAAATTCAAGGAGCAATGGCTCTTCTCGTTCCAGATCCCCTGACGCTACACCTCCAAAGCGTTATAATAAAAGGACCTCTGTATCTCGTAGCAGGTCTAGATCGAGCTCTGCATCCGGGCAAAAGGGTTTGGTTTCCTATGGTGATGCTAGTCCTGATTCTGGGGCTAGGTAG | 1974 | 0.4397 | MSMEKNPCVFFDVSVDGDPVERIVIELFSSVVPKTAENFRALCTGEKGIGEATGKPLHYKGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLKHDGPGVLSMANSGPNTNGSQFFIIFKRQPHLDGKHVVFGKVTKGIETLKKMEQLGTADGKPTQPIKIVDCGEVSKAKSEHTIEKEKGKRKKSTKSLTSDDSSDADKKFSRKRKTSSKDRRKRKRRYSSSDSDSDSLSSDSESDSASESDSSYSDSSSSSYEKHKKRKRSKHRHGKKKSIGRKQRRSQHSRRRSKHKSKRSSEGSSDTESDSSSASDKKAGRLVSGRKQQADDKAKKNLDTGEKSSSLTLQSPTSPELEVDPKVRTTVDKQSHEEGELSPENGEFLNNGHDTQTEFSKPSNQRAYSDDSNHNRDASPGRSPTKNSEELNRGRALLASPDHKASEPAASKHGRGILKSPSPNGMPKRVKKGRGFTERFAFVRKYRTPSPERSPRAYRYGDRNVRRNFDRNTSYRNYSERSPPRRFRSPPRGSRPRYQSRRSRSRSISRSPVRGRYRDNVRGRSPIRSVSPDGRRPPISDRLKSRLGRRGSQQSPDRKRSKSNSRSNGSSRSRSPDATPPKRYNKRTSVSRSRSRSSSASGQKGLVSYGDASPDSGAR* | 658 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal3g3792 | 657 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 174 | IPR002130 | GO:0000413|GO:0003755 | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 386 | 407 | - | - | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 233 | 259 | - | - | |
| Mal3g3792 | 657 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | IPR002130 | GO:0000413|GO:0003755 | |
| Mal3g3792 | 657 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | IPR002130 | GO:0000413|GO:0003755 | |
| Mal3g3792 | 657 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | IPR002130 | GO:0000413|GO:0003755 | |
| Mal3g3792 | 657 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | IPR002130 | GO:0000413|GO:0003755 | |
| Mal3g3792 | 657 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | IPR002130 | GO:0000413|GO:0003755 | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 469 | 512 | - | - | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 343 | 357 | - | - | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 573 | 602 | - | - | |
| Mal3g3792 | 657 | CDD | cyclophilin_ABH_like | 7 | 173 | - | - | |
| Mal3g3792 | 657 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 17 | 173 | IPR002130 | GO:0000413|GO:0003755 | |
| Mal3g3792 | 657 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 | 3 | 409 | - | - | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 604 | 644 | - | - | |
| Mal3g3792 | 657 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 3 | 409 | - | - | |
| Mal3g3792 | 657 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 59 | 76 | IPR020892 | GO:0003755|GO:0006457 | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 264 | 300 | - | - | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 176 | 213 | - | - | |
| Mal3g3792 | 657 | SUPERFAMILY | Cyclophilin-like | 4 | 176 | IPR029000 | - | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 301 | 342 | - | - | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 363 | 381 | - | - | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 176 | 657 | - | - | |
| Mal3g3792 | 657 | MobiDBLite | consensus disorder prediction | 526 | 549 | - | - | |
| Mal3g3792 | 657 | Gene3D | - | 1 | 182 | IPR029000 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal3g3792 | Mal-Chr3 | 115521669 | 115527181 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal3g3792 | 25 | 171 | U-box Gene Family | AT5G67530 | 48.993 | 3.73e-35 | 139 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal3g3792 | K09566 | - | gmx:100791082 | 720.309 |