Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3790 ATGTCCAACAATCATAATCTAAAATTTGATGGTAGCTCATTTATCATTGATATCACCAACACCCTCACAAAAGTCACTTCTAAATACACCAATGCAAAAAGAAGGTGGCGTTTTGCATACACAGCTATTTATTCTAGAAGGGTTATGCTTTCCCTTGCAAAAGAGGTCATATCTAGAAAAAATTCTAATCATTACACAAAACTCTTTCACACAGAATCTTCAAGTTCCACCACCACTCTTGATATAATTGAACCACTAATTACTCAACATAATGGAACCAAACATTTCTCTTTGGTTTCTGATGTTGTTGATAAAACCAAACTTGCTGATATGGTTAAGGACAAAAACTTGAAAGCCTTAAGTGAGTTTGGAGGAGTTGAAGGTGTTGCGAATGTTCTTGGAACAGTTCCAAAAAAAGGAATCATTGGAAGTGATGACGATATTTCGAGACGGCTCGAGTTGTTTGGTTCAAACACTTACAAAAAGCCACCACCAAAAGGTCTTTTACATTTTGTGCTTGAAGCTTTGAATGATACAACTATTATCATCCTTCTTGTTTGTGCTGGTCTTTCCCTTGGTTTTGGCATAAAAGAACATGGACCAGGGGAAGGTTGGTATGAAGGTGGAAGTATATTTCTAGCAGTTTTTCTTGTTGTGGTTGTAAGTGCACTAAGCAATTTCAGACAAGAAAGACAATTTCACAAATTGTCTAAGATAAGCAACAATATCAAAGTTCAAGCTGTGAGAAATGGAAGGCCACAACAGATATCAATTTTTGATGTTCTTGTGGGAGATATTGTGTCTCTCAAGATTGGAGATCAAATTCCAGCTGATGGAGTATTTTTATCTGGTTATTCGTTGCAAGTGGACGAATCTAGCATGACAGGTGAGAGCGACCATGTAGAGATTGACCCTTTAAGGGCGCCTTTTTTGTTGTCCGGCGCAAAAATTGTGGATGGATATGCTCAGATGCTTGTAACATCTGTGGGAAAAAACACATCATGGGGACAAATGATGAGCTCCATATCGCGAGACACTAACGAAAGAACGCCGTTACAAGCGCGCCTCGACAAGTTAACCTCTTCGATCGGAAAGGTTGGACTTGCAGTTGCGTTTCTTGTTCTTCTAGTTTTGTTAATTCGTTATTTCACCGGTAACTCACACGATGAGAAAGGGAATAAGGAGTTTCAAGGAAGCAAAACCGATATAAGCGATGTTTTGAATTCTGTTGTGAGTATCGTTGCGGTTGCAGTCACTATTGTGGTTGTGGCAATCCCTGAGGGCTTGCCATTGGCTGTGACACTCACTCTTGCTTACTCCATGAAAAGAATGATGGCAGATCATGCTATGGTGAGGAAACTTTCAGCTTGTGAAACTATGGGATCAGCAACAGTTATCTGCACTGATAAAACAGGTACCTTGACATTGAATCAAATGAGGGTGACCAAGTTTTGTCTTGGTCTTGAAAATTTTATGGAAAACTTTTCCAATGCAATGGCACCAAAAGTTCTTGAGTTGTTCCATCAAGGGATAGGACTCAATACAACTGGTAGTGTCTATAAGCCTCCATCAGGATCTGAACCTGAAATTTCAGGGAGTCCAACGGAGAAAGCTATACTCATGTGGGCAGTATTGGATTTAGGTATGGACATGGATGAAACGAAACAGAAACATAAAGTCCTTCATGTTGAAACATTTAACTCAGAGAAGAAACGAAGCGGCGTTGCGATAAGGAAAGAGAATGGCGACAACAGCGTTCATGTGCATTGGAAAGGAGCTGCAGAGATGATACTTGCAATGTGTACAAACTATATTGATAGTAACGGCGTGAGGAAGTCCCTTGACGAAGAAGAACGGAGTAAAATTGAGAGGATGATTCAAGGTATGGCTGCTAGTAGTCTAAGATGTATTGCTTTTGGTCACACTGAGATTTCAGATTCAGAAGATATTGATTATATGATCAAAAGGGAGAAAAAAACACATCAAATGCTAAGAGAAGATGGATTGACATTGCTTGGCATTGTTGGCCTCAAGGATCCATGCAGACCAAACACTAAGAAAGCTGTGGAAACTTGCAAAGCTGCAGGAGTTGAAATTAAGATGATCACCGGCGATAACATATTCACCGCTAAGGCAATAGCAACAGAATGTGGAATATTAGATTCTAATAATGATCATGAAAAGGCTGGAGAAGTGGTGGAAGGTGTTGAATTCAGAAACTATACAGAGGAAGAGAGAATGGAAAAAGTCGATAAGATCCGAGTAATGGCAAGATCATCCCCTATGGACAAACTTTTGATGGTGCAATGCTTAAGAAAGAAAGGCCATGTAGTTGCGGTCACAGGCGATGGCACAAACGATGCACCTGCATTAAAAGAAGCTGATATAGGACTTTCTATGGGAATCCAAGGAACCGAAGTCGCCAAAGAAAGTTCCGATATCGTCATCTTAGACGACAACTTCAATTCTGTTGCAACTGTTTTAAGATGGGGAAGATGTGTTTACAACAACATCCAGAAATTTATTCAGTTTCAACTAACAGTGAATGTTGCAGCACTTGTGATAAACTTTATTGCAGCTGTTTCTTCTGGTGATGTTCCTTTAACAACAGTTCAACTTCTTTGGGTGAATCTCATTATGGATACACTAGGTGCTTTGGCACTAGCAACAGAAAGACCTACAAAGGAGTTAATGAAGAAAAAGCCAATAGGTCGAACCGCGCCTCTTATTACAAACATTATGTGGAGAAACCTTCTTGCTCAAGCTTCATATCAGATTGCAGTTCTTCTGATTCTGCAGTTTTATGGAAAATCAATCTTCAATGTAAGTAAGGAGGTAAAGGATACTCTAATTTTTAATACTTTTGTTCTCTGCCAAGTTTTCAATGAGTTCAACTCAAGAAGTATGGAGAAACTTTATGTATTTGAAGGGATTCTGAAAAACCACCTGTTTCTTGGAATTATTGGGATTACTATTGTTCTTCAAATCTTGATGGTGGAACTGCTAAGGAAGTTTGCTGATACAGAAAGATTAACATGGGAGCAATGGGGAATTTGTATTGGAATTGCAGTTGTTTCATGGCCACTTGCTTGCTTAGTAAAGCTCATACCTGTTTCAGATAAACCTTCCTTCAGTTATACTAAGTGGGTTAAATTATTAGTCGTCAAGATTAAGAATGCTCTTTAA 3186 0.3908 MSNNHNLKFDGSSFIIDITNTLTKVTSKYTNAKRRWRFAYTAIYSRRVMLSLAKEVISRKNSNHYTKLFHTESSSSTTTLDIIEPLITQHNGTKHFSLVSDVVDKTKLADMVKDKNLKALSEFGGVEGVANVLGTVPKKGIIGSDDDISRRLELFGSNTYKKPPPKGLLHFVLEALNDTTIIILLVCAGLSLGFGIKEHGPGEGWYEGGSIFLAVFLVVVVSALSNFRQERQFHKLSKISNNIKVQAVRNGRPQQISIFDVLVGDIVSLKIGDQIPADGVFLSGYSLQVDESSMTGESDHVEIDPLRAPFLLSGAKIVDGYAQMLVTSVGKNTSWGQMMSSISRDTNERTPLQARLDKLTSSIGKVGLAVAFLVLLVLLIRYFTGNSHDEKGNKEFQGSKTDISDVLNSVVSIVAVAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADHAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFCLGLENFMENFSNAMAPKVLELFHQGIGLNTTGSVYKPPSGSEPEISGSPTEKAILMWAVLDLGMDMDETKQKHKVLHVETFNSEKKRSGVAIRKENGDNSVHVHWKGAAEMILAMCTNYIDSNGVRKSLDEEERSKIERMIQGMAASSLRCIAFGHTEISDSEDIDYMIKREKKTHQMLREDGLTLLGIVGLKDPCRPNTKKAVETCKAAGVEIKMITGDNIFTAKAIATECGILDSNNDHEKAGEVVEGVEFRNYTEEERMEKVDKIRVMARSSPMDKLLMVQCLRKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMKKKPIGRTAPLITNIMWRNLLAQASYQIAVLLILQFYGKSIFNVSKEVKDTLIFNTFVLCQVFNEFNSRSMEKLYVFEGILKNHLFLGIIGITIVLQILMVELLRKFADTERLTWEQWGICIGIAVVSWPLACLVKLIPVSDKPSFSYTKWVKLLVVKIKNAL* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3790 1061 SUPERFAMILY HAD-like 465 886 IPR036412 -
Mal3g3790 1061 PANTHER CATION TRANSPORTING ATPASE 18 1025 - -
Mal3g3790 1061 PANTHER CALCIUM-TRANSPORTING ATPASE 18 1025 - -
Mal3g3790 1061 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 408 489 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal3g3790 1061 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 211 384 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal3g3790 1061 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 752 861 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal3g3790 1061 Gene3D - 144 343 - -
Mal3g3790 1061 SFLD p-type atpase 449 834 IPR044492 -
Mal3g3790 1061 Pfam haloacid dehalogenase-like hydrolase 465 795 - -
Mal3g3790 1061 SMART Cation_ATPase_N_a_2 122 196 IPR004014 -
Mal3g3790 1061 ProSitePatterns E1-E2 ATPases phosphorylation site. 469 475 IPR018303 -
Mal3g3790 1061 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 107 1038 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mal3g3790 1061 Gene3D - 464 826 IPR023214 -
Mal3g3790 1061 CDD P-type_ATPase_Ca_PMCA-like 148 914 - -
Mal3g3790 1061 SUPERFAMILY Calcium ATPase, transduction domain A 242 341 IPR008250 -
Mal3g3790 1061 SUPERFAMILY Calcium ATPase, transmembrane domain M 123 1039 IPR023298 -
Mal3g3790 1061 Pfam Cation transporting ATPase, C-terminus 866 1036 IPR006068 -
Mal3g3790 1061 Gene3D - 174 1035 - -
Mal3g3790 1061 SFLD C1.7: P-type atpase like 449 834 - -
Mal3g3790 1061 PRINTS P-type cation-transporting ATPase superfamily signature 673 684 - -
Mal3g3790 1061 PRINTS P-type cation-transporting ATPase superfamily signature 781 800 - -
Mal3g3790 1061 PRINTS P-type cation-transporting ATPase superfamily signature 805 817 - -
Mal3g3790 1061 PRINTS P-type cation-transporting ATPase superfamily signature 290 304 - -
Mal3g3790 1061 PRINTS P-type cation-transporting ATPase superfamily signature 695 705 - -
Mal3g3790 1061 PRINTS P-type cation-transporting ATPase superfamily signature 467 481 - -
Mal3g3790 1061 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 473 684 IPR023299 GO:0000166
Mal3g3790 1061 Pfam E1-E2 ATPase 243 445 - -
Mal3g3790 1061 Gene3D - 477 680 IPR023299 GO:0000166
Mal3g3790 1061 Pfam Cation transporter/ATPase, N-terminus 124 191 IPR004014 -
Mal3g3790 1061 PRINTS Sodium/potassium-transporting ATPase signature 460 481 - -
Mal3g3790 1061 PRINTS Sodium/potassium-transporting ATPase signature 211 231 - -
Mal3g3790 1061 PRINTS Sodium/potassium-transporting ATPase signature 588 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3790 Mal-Chr3 115499471 115502656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3790 32 1048 Primary Pumps ATPases AT3G63380 69.510 0.0 1365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3790 K01537 - gmx:100790034 1649.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3790 3 115499471 115502656 Mal1g4004 1 83836085 83836699 PCT