Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3766 ATGGAGGTGGAATTGATCAGAGTAGGTATGAAAGAGAAAGATCGCATGGGATTTTTATTGGAATTCCACGACAGTATGCGATTGGCGGGAAGGTTCAACAAGATAGGGTGGTCTCAAGATAACATCAATCTGTTCAACAAAAAGATTGACAATCTCCGATTATCCTGCACTAGGCCGTGGTACGTCGACTCTTCGAATCTGGATCATTTTAACATGTTTTACAAGGGAAACAGGATTCAAGTGATTAACAGTGAACTCAGATATGATATGGTTGAATGCTCGATTTGTTGTGATGATCTAATCGACTCAGTAACAAGGTGTGGGCACTTCTTCTGTTATGATTGTATCTACAAAATTCTTATAGATGGTCACCCATGCCCAAATTGCCGCCGTAGTTTACACCCGTTTCATCAGGGTCTTTGA 423 0.409 MEVELIRVGMKEKDRMGFLLEFHDSMRLAGRFNKIGWSQDNINLFNKKIDNLRLSCTRPWYVDSSNLDHFNMFYKGNRIQVINSELRYDMVECSICCDDLIDSVTRCGHFFCYDCIYKILIDGHPCPNCRRSLHPFHQGL* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3766 140 SMART ring_2 93 129 IPR001841 -
Mal3g3766 140 Pfam Zinc finger, C3HC4 type (RING finger) 92 129 - -
Mal3g3766 140 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 139 IPR013083 -
Mal3g3766 140 ProSiteProfiles Zinc finger RING-type profile. 93 130 IPR001841 -
Mal3g3766 140 SUPERFAMILY RING/U-box 92 136 - -
Mal3g3766 140 ProSitePatterns Zinc finger RING-type signature. 107 116 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3766 Mal-Chr3 115141127 115141652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3766 89 137 C3H Transcription Factor Family AT2G17450 40.741 4.54e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3766 - K22651 mtr:MTR_7g091300 60.077