Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3749 ATGGATCTTCGTAGCAACACCCAAAGTTTGAAGAGAAAACTCGAATGGACCGAAGAAGATGAAGAAGAAGTAACAACTAAACCTCGTCGTTTAGATCTTCCCACTGACATCTCTAATCGGATCCATATCCTCAAATCCACTTTTTCATCCTCCGCTTCAGATCGTTCCTCCGCAAGGACTGCTCTCTTCGTCCTCTCCGAATTCGCTAAAGACGAGGATATTGTGGATGTTGTTGTGAATTGCGGTGCTGTTCCTGTTCTGGTGAAGATTCTGGAGACGGCGTATACGGTGGTGACCGGAGATGGTGGCGGTGACTGTGATGCCGATGCTTATAAGTATGATATGGAGAAAGAATCTGCATACGTCCTTGGTCTCCTCGCTGTTAAACCAGAGTATCAACAACTCATTGTTGATGCTGGAGCCTTGCCCTATCTTGTAGAGTTGCTAAAGAGACGCAAAAGCCCTATCATTTCTCAAGCACTTTTTTCTGGCCTTCTTAGGAAAGCAGCTGACGCAATAACCAGCCTTGCCCATGAAAATACCAACATCAAGACCCTTGTCAGGTTGGATGGTGGTATCCCTCCTCTTGTTGAATTGCTTGAGTTCAATGATACAAAGGTACAGAGAGCAGCTGCAGGTGCCTTGCGGACTCTCGCATTTCAAAATGCTGAGAATAAAAATCAGATTATTGAATGCAATGCGTTGCCAACTCTTGTACTAATGCTTGGATCAGAAGATCCCTCAATACATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTCCATTCTTCGCCAGAAATCAAGAGACAAGTTCTTCTTGCCGGGGCTCTACAGCCAGTTATTTGCTTACTAAGTTCCTGCTGTTTGGAGAGCCGAAGAGAAGCAGCTCTTTTAATTGGTCAATTTGCTACAACTGATTCAGATTGCAAGATTCACATTGCCCAAAGAGGGGCTATAAACCCCTTAATTGACATGCTTAAGTCTCCAGATTTACAGCTTAGGGAAATGTCAACTTTTGCACTTGGGAGGTTGGCACAGGACTCACACAATCAAGCTGGTATCGCTTATAACGGAGGTATAGAGCCTCTGCTTGACCTTCTTGACACAAAGAATGGTTCCGTTCAACACAATGCAGCTTTTGCTCTCTATGGTCTGGCTGATAATGAGGACAATGTTGCAGTTATTATTAAGGCTGGTGGTTTTCAAAAACTGCATGATGGACATTTCAATGCTCAACCTACTCAAGAGTGTGTAACAAAGACATTAAAAAGATTGGAAGAGAAGATGCAAGGGCGAGTTCTGAAACACATGTTATATCTTATGCGCTCTGGGGAAAAGAGTCTTCAAATACGCGTAGCTCTTGCTCTTGCACATTTATGTTCCCCTGATGATCGTAAAACTATTTTCATTGACAATAATGGATTAGAGCTGCTGTTGGGTCTTCTTCAATCTACAAACTCAAAGCAGAAAGGTGAAGCTTCAGCAGCGCTTCACACAATGGCTATGAAAGACATGTGTCCCTCTATTGTTGATCCTGCTCCTACATCACCAACTCCCCGGGTTTATTTGGGTGAGCAATATGTAAACAATCCTAAACTTTCGGATGTCACATTCATAGTCGAAGGCAAAAGCTTTTATGCTCATAGAGTTTGTTTACTTTCTTCTTCCGATATATTTCGTGCAATGTTTGATGGGGGTTATAGGGAAAAGGACGCCAAAAATATAGAGATTCCAAATATTAAATGGGATGTCTTTGAGTTGATGATGAGATATATATACACTGGAGCAGTAGATATTGATTTGGATGTTGCTCCGGACCTCCTTAAAGCTGCAGATCAATATCTTCTTGATGGTCTTAAGGGTCTTTGTGAATATGCTATTTCTGAGGATATTTCTGTGGAAAATGTTTCACAAATGTATGTGATGTCAGACACTTTTAATGCCAAATCTTTAAGATATGCGTGCATACTCTTTGTCCTGGAGCAATTTGATGATCTGAGTACCAAACCATGGTATCGTCGCTTTCTTCATTGCATTGTACCAGACATTCGCATATTCTTCTCAACTTTACTTACCCATCCTCATTCAGCTGACTCGTGCTCTCGCGTGGATCCTTAG 2118 0.4226 MDLRSNTQSLKRKLEWTEEDEEEVTTKPRRLDLPTDISNRIHILKSTFSSSASDRSSARTALFVLSEFAKDEDIVDVVVNCGAVPVLVKILETAYTVVTGDGGGDCDADAYKYDMEKESAYVLGLLAVKPEYQQLIVDAGALPYLVELLKRRKSPIISQALFSGLLRKAADAITSLAHENTNIKTLVRLDGGIPPLVELLEFNDTKVQRAAAGALRTLAFQNAENKNQIIECNALPTLVLMLGSEDPSIHYEAVGVIGNLVHSSPEIKRQVLLAGALQPVICLLSSCCLESRREAALLIGQFATTDSDCKIHIAQRGAINPLIDMLKSPDLQLREMSTFALGRLAQDSHNQAGIAYNGGIEPLLDLLDTKNGSVQHNAAFALYGLADNEDNVAVIIKAGGFQKLHDGHFNAQPTQECVTKTLKRLEEKMQGRVLKHMLYLMRSGEKSLQIRVALALAHLCSPDDRKTIFIDNNGLELLLGLLQSTNSKQKGEASAALHTMAMKDMCPSIVDPAPTSPTPRVYLGEQYVNNPKLSDVTFIVEGKSFYAHRVCLLSSSDIFRAMFDGGYREKDAKNIEIPNIKWDVFELMMRYIYTGAVDIDLDVAPDLLKAADQYLLDGLKGLCEYAISEDISVENVSQMYVMSDTFNAKSLRYACILFVLEQFDDLSTKPWYRRFLHCIVPDIRIFFSTLLTHPHSADSCSRVDP* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3749 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 140 191 IPR000225 GO:0005515
Mal3g3749 705 SMART BTB_4 534 631 IPR000210 GO:0005515
Mal3g3749 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 233 275 IPR000225 GO:0005515
Mal3g3749 705 SUPERFAMILY ARM repeat 52 406 IPR016024 -
Mal3g3749 705 ProSiteProfiles BTB domain profile. 534 601 IPR000210 GO:0005515
Mal3g3749 705 Pfam BTB/POZ domain 526 629 IPR000210 GO:0005515
Mal3g3749 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 317 359 IPR000225 GO:0005515
Mal3g3749 705 SUPERFAMILY ARM repeat 431 504 IPR016024 -
Mal3g3749 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 358 400 IPR000225 GO:0005515
Mal3g3749 705 Pfam Armadillo/beta-catenin-like repeat 222 261 IPR000225 GO:0005515
Mal3g3749 705 Pfam Armadillo/beta-catenin-like repeat 191 219 IPR000225 GO:0005515
Mal3g3749 705 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 6 701 IPR044282 -
Mal3g3749 705 SUPERFAMILY POZ domain 525 628 IPR011333 -
Mal3g3749 705 SMART arm_5 180 220 IPR000225 GO:0005515
Mal3g3749 705 SMART arm_5 222 262 IPR000225 GO:0005515
Mal3g3749 705 SMART arm_5 306 346 IPR000225 GO:0005515
Mal3g3749 705 SMART arm_5 71 128 IPR000225 GO:0005515
Mal3g3749 705 SMART arm_5 264 304 IPR000225 GO:0005515
Mal3g3749 705 SMART arm_5 129 178 IPR000225 GO:0005515
Mal3g3749 705 SMART arm_5 462 502 IPR000225 GO:0005515
Mal3g3749 705 SMART arm_5 347 387 IPR000225 GO:0005515
Mal3g3749 705 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 191 226 IPR000225 GO:0005515
Mal3g3749 705 Gene3D - 287 512 IPR011989 -
Mal3g3749 705 Gene3D Potassium Channel Kv1.1; Chain A 523 660 IPR011333 -
Mal3g3749 705 MobiDBLite consensus disorder prediction 1 27 - -
Mal3g3749 705 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 6 701 - -
Mal3g3749 705 Gene3D - 163 286 IPR011989 -
Mal3g3749 705 Gene3D - 19 162 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3749 Mal-Chr3 114922479 114927522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3749 200 475 U-box Gene Family AT3G46510 26.449 4.16e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mal3g3749 BTB 9.2e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3749 - - qsu:112036025 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3749 3 114922479 114927522 Mal3g3749 3 114922479 114927522 ECH