Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3713 ATGCCTATTTCTCCTGACGTATTAGAACAAATCTTGCCCAAGATTGGAGAATATGCTGAGAAGATGGTCGCAAATAACCATGAAGGTCATAATATGTGGAAGATAGATGTGAGGCTTACTATCTATACATGCCATATTGAAGATGAGGATGCTGTGAGAGCCCTACTGGTTGTGAATGTAATGGATCATTCATCTTGTTACTTTAGAGATCAATGTTCAATTTGTTTAGAAGAGCTCTCCAATGGATCAAAGTCAGAACATGTTATGACCAAATGTTTGCATGTTTTTCATAGAGAGTGTATTTTTCAATGGCTCAAAAGATGCTTCAGTAGTCAATCATCCATCTCGTGTCCATTGTGTCGCAATAATCGGATTGTGTTTGAATGA 387 0.3747 MPISPDVLEQILPKIGEYAEKMVANNHEGHNMWKIDVRLTIYTCHIEDEDAVRALLVVNVMDHSSCYFRDQCSICLEELSNGSKSEHVMTKCLHVFHRECIFQWLKRCFSSQSSISCPLCRNNRIVFE* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3713 128 PANTHER GB|AAD18119.1-RELATED 56 121 - -
Mal3g3713 128 SMART ring_2 72 120 IPR001841 -
Mal3g3713 128 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 56 121 - -
Mal3g3713 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 122 IPR013083 -
Mal3g3713 128 SUPERFAMILY RING/U-box 71 123 - -
Mal3g3713 128 Pfam Ring finger domain 70 121 IPR001841 -
Mal3g3713 128 ProSiteProfiles Zinc finger RING-type profile. 72 121 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3713 Mal-Chr3 114543048 114543434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3713 70 122 C3H Transcription Factor Family AT4G12190 44.444 1.32e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3713 - - mtr:MTR_5g094680 182.185