Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3668 ATGCCTATTTCTCCTGACATATTAGAACAAATCCTGCCCAAGATTGGAGAATATGCTGAGAAGATGGTCGCAAATAACTATGAAGGTCATAATATGTGGAAGATAGATGTGAGGCTTACTGTCTATACATGCCATATTGAAGATGAGGATGCTGTGAGAGCCCTACTTATTGTGAATGTAATGGATCATTCATCTTGTTCAGATCAATGTTCAATTTGTTTGGAAGAGCTCTCCAATGGATCAAAGTCAGAACATGTTATGACTAAGTGTTTGCATGTTTTTCATAGAGAGTGTATTTTTCAATGGCTCAAAAGATGCTTCAGTAGTCAATCATCCATCTCGTGTCCATTGTGTCGTAATAATCGGATTGTATATTTTCATTTTCTTTGA 390 0.3641 MPISPDILEQILPKIGEYAEKMVANNYEGHNMWKIDVRLTVYTCHIEDEDAVRALLIVNVMDHSSCSDQCSICLEELSNGSKSEHVMTKCLHVFHRECIFQWLKRCFSSQSSISCPLCRNNRIVYFHFL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3668 129 ProSiteProfiles Zinc finger RING-type profile. 70 119 IPR001841 -
Mal3g3668 129 SUPERFAMILY RING/U-box 69 123 - -
Mal3g3668 129 PANTHER RING ZINC FINGER PROTEIN-RELATED 32 122 - -
Mal3g3668 129 SMART ring_2 70 118 IPR001841 -
Mal3g3668 129 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 123 IPR013083 -
Mal3g3668 129 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 32 122 - -
Mal3g3668 129 Pfam Ring finger domain 68 119 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3668 Mal-Chr3 114035796 114036185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3668 67 120 C3H Transcription Factor Family AT4G12190 43.636 7.69e-09 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3668 - - mtr:MTR_5g094680 173.326