Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3630 ATGGCAATGGAGTTGGAGAGAGTGCAATGCTCCTACGAATCCTTGGACGAATCGTTCGAAATCGGTAAAGAGATGTATCGTGGACAACAATACAGTCAAATCTACTTCGCTCGTCTTCACTTGATGCGAACTCTCTTGTATTCTCTTGTTCCTCATTGGAAACCTAATTCTCCTGTATGCACGGTGTTGGGATTGGAAGAGGGCAAGGAGTGTGTTATTGTTGGAACACTGTTTAAAGATATGAAGTTGAAGCCTTGTATACTTGATGAGTATTCTAAGGAGAGATCAGTGGTTCCGCTTGTCAAGCCGCATAACTTTGTTCATGAAGATGATTATCTTGTTTTGGAAGATGAAAGTGGAAGAGTTAAACTTGGTGGGAATATCATTGTACCATCTGTCTATGTAACAGGTATTGTTGTTGCTTTACATGGCAAGGAGACGGGAGCAGGTGATTTTTTGGTTCAAGAAGTTCTAGAAGCTGGCTTACCACCGCAGATAGAATTCCCCATTAAATCAAGGGAAGACAGATATGTTGTTCTTGTGTCAGGATTAAGTGTTGGGAGCAGCAAGTCTAACCCTCTTCAGTTTCAGCTTCTCGTTGATCATATTTCTGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCGTCACAAATTGTTCGTGTAGTCATTGCTGGAAATTCTGTTGAGATATCTCGTGGGCTTCTTAATGGACAGAATTTGGCTTCAAAAGATCTCTCGAAAATGGCAGAACCAGTGAAGGAGCTGGATATTCTGTTGAATCAGATTGCTGCTGGTTTGCCACTGGATATCATGCCAGGACCCTGCGACCCTGCTAATTTCTCATTACCACAGCAGGCGTTGCATAGGTGCCTTTTCCCTGGGTCATCAGTCTACAACACTTTTAGATCTTGTACAAATCCTCATTGTTTTGAGCTTGATGGTATCAGGTTTCTTGGAACATCTGGTCAGAATATAGATGATCTTGAGAAGTATTCAGAGGCAAAAGATAAGATTGACTTCATGGAAAGGACATTACGATGGAGGCATTTGGCACCAACTGCTCCTAATACCCTTGGGTGCTATCCTTATACTGATAGGGATCCTTTCTTCATTGAGAGCTGTCCTCATGTTTACTTTGTTGGCAATCAGGATAAATATGATACTCGTGTGATAAAGGGATCAGAAGGCCAATTGGTTAGACTCGTGTGTGTTCCTAAATTCAGTGAAACTGGAGTTGCAGTTATGTTGAATCTGAGGGATCTTGAATGTCATGCTCTCAGTTTTGGAACTCAGTTCAGCCCATAA 1308 0.4197 MAMELERVQCSYESLDESFEIGKEMYRGQQYSQIYFARLHLMRTLLYSLVPHWKPNSPVCTVLGLEEGKECVIVGTLFKDMKLKPCILDEYSKERSVVPLVKPHNFVHEDDYLVLEDESGRVKLGGNIIVPSVYVTGIVVALHGKETGAGDFLVQEVLEAGLPPQIEFPIKSREDRYVVLVSGLSVGSSKSNPLQFQLLVDHISGHLGDEKEQSIASQIVRVVIAGNSVEISRGLLNGQNLASKDLSKMAEPVKELDILLNQIAAGLPLDIMPGPCDPANFSLPQQALHRCLFPGSSVYNTFRSCTNPHCFELDGIRFLGTSGQNIDDLEKYSEAKDKIDFMERTLRWRHLAPTAPNTLGCYPYTDRDPFFIESCPHVYFVGNQDKYDTRVIKGSEGQLVRLVCVPKFSETGVAVMLNLRDLECHALSFGTQFSP* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3630 435 Pfam DNA polymerase alpha/epsilon subunit B 178 387 IPR007185 GO:0003677|GO:0006260
Mal3g3630 435 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 3 429 IPR024826 -
Mal3g3630 435 Gene3D - 169 434 - -
Mal3g3630 435 CDD MPP_PolD2_C 177 429 IPR041863 -
Mal3g3630 435 Pfam DNA polymerase delta subunit OB-fold domain 30 157 IPR040663 -
Mal3g3630 435 Gene3D - 37 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3630 Mal-Chr3 113659746 113664889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3630 6 434 Core DNA Replication Machinery Family AT2G42120 77.622 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3630 K02328 - gmx:100780072 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3630 3 113659746 113664889 Mal3g3630 3 113659746 113664889 ECH