Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3619 ATGGTTACTCATGGATCTTATCATTTATCTGTTGAGCAGCTGAATTTCTCTTCTCAGCATGAGAAGTTGTCTCCAACAATTTCAGCAGCAAGTTTATCAACTTCTCTTGGAAGCACTTCTTCTAGTGGGAATGTAGTCTCAAGTAAAACAAGAATTAGATGGACAAAGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGGGGTGCTGAGAAGGCAACACCAAAAGCTATATTAAAGATGATGGACTCTGATGGTTTGACCATATTCCATGTAAAAAGTCATTTGCAGAAATATAGAACAGCCAAATTCATGCCAGAGACAGCTCAAGGGAAATCTGACAAAAGAATCCATACAGAGGATGTGCATCATGTTGGTGTTAAAACTGGCTTTCAAATCAAGGAGGCACTTCAACTTCAATTAGAAGCACAAAGACGTCTTCATGAACAACTAGAGATTCAAAGAACATTACAATTGCGACTTGAGGAACAAGGCAGACAGCTGAAAAAAATGTTTGATCAGCAGCAGAAGAGTTCTAATAACCTCTTCAATACTCCAAATACAATCATTGATGATACAAAAATTAGTCACAAAGATGTTGAGGTTTCCATTTCTGAAGACATAACTTGTAAATCCTCTCCGAACGCATAA 657 0.379 MVTHGSYHLSVEQLNFSSQHEKLSPTISAASLSTSLGSTSSSGNVVSSKTRIRWTKDLHEKFVECVNRLGGAEKATPKAILKMMDSDGLTIFHVKSHLQKYRTAKFMPETAQGKSDKRIHTEDVHHVGVKTGFQIKEALQLQLEAQRRLHEQLEIQRTLQLRLEEQGRQLKKMFDQQQKSSNNLFNTPNTIIDDTKISHKDVEVSISEDITCKSSPNA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3619 218 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Mal3g3619 218 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Mal3g3619 218 Gene3D - 48 107 - -
Mal3g3619 218 Coils Coil 136 156 - -
Mal3g3619 218 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Mal3g3619 218 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 26 209 IPR044848 GO:0003700
Mal3g3619 218 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 26 209 - -
Mal3g3619 218 Pfam Myb-like DNA-binding domain 53 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3619 Mal-Chr3 113554348 113556556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3619 6 183 G2-like Transcription Factor Family AT3G04450 45.055 3.41e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal3g3619 Myb_DNA-binding 1.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3619 - - cam:101504038 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3619 3 113554348 113556556 Mal3g3619 3 113554348 113556556 ECH