Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3618 ATGTATCAACATTGGTCAAGGATGTATGGAACTCAATGGGAATCCTACATGGGAATTAACAACCTAGTTAAGGTTGTTGGATCAGAACAGGTGAATTTTGAGCCAATCAAATCACCTTGCAACAACAACATTGTCACTAGTACTAATCTTCAAGCTGGAGAATATTATGATGAGGATGAGATTGATCTTCCTGATTGGTGTTTTGATCAGTTTCCAAAGATAACAGATCCTCCAATGCTGAATTGTCAAGCCTCTGGAGGAGATAACTTCACTGCTTCTCAGTTCACAAGCTCCTTGTACTCCGTTGATGAATCTTTGTTGTCTAACAGTGCAGATAGTCATAATTCTTCTGAAGAAGAATATAGTAATTTTCAGTCTGGAAATATGTCATTTTATGATCACTTTCCAAAAAAACATGATGAATTGATGAGGAATGATGCTTCCATAGATGAGAAGTCCCTTGAAATTTCCTTTCAGAGAACTAAGTCGGGACCATGTACAAAGTCACAAAAGCATAGTCCTCAACTTTATGGAATTGCTTGTGACACTTCTAGCAACTCTGCTTCTAGGAAAGCTCTAACAAGTAAAAGAAGAGTAAGATGGACCGAGGAACTGCATGAATCATTCATGACGATCGTTGATCACCTTGGTGGTGCAGAAAAGGCAAAGCCTAAGGCTATACTAGATATGATGAAATCAAATTTGCTATCCATTTCTCATGTTAAAAGTCATTTGCAGAAATGTAGATCTACGATACGCGTGCATCAAGCTTTGCAGGAAAGATCCGAGGAAGGACATAGAACAGATAGAGTCACCGATCTTCAACTCAAAATCAGCCTAAGACAAATTGAAGAATCGCGACAATTGCATTTAGAGGTTCGAAGAAATATTTCCCAACAGTTAGAGACGCAAAGAAATTTGCAAAAGCTAATTGAGCAACATAGCAAGAAGCTCAAACTAATGAACAAAGAAAGAACCAAACAAAGAAAATCGTGGACACAACGAGAAAGGACAGTTCCCAAATAA 1026 0.3801 MYQHWSRMYGTQWESYMGINNLVKVVGSEQVNFEPIKSPCNNNIVTSTNLQAGEYYDEDEIDLPDWCFDQFPKITDPPMLNCQASGGDNFTASQFTSSLYSVDESLLSNSADSHNSSEEEYSNFQSGNMSFYDHFPKKHDELMRNDASIDEKSLEISFQRTKSGPCTKSQKHSPQLYGIACDTSSNSASRKALTSKRRVRWTEELHESFMTIVDHLGGAEKAKPKAILDMMKSNLLSISHVKSHLQKCRSTIRVHQALQERSEEGHRTDRVTDLQLKISLRQIEESRQLHLEVRRNISQQLETQRNLQKLIEQHSKKLKLMNKERTKQRKSWTQRERTVPK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3618 341 SUPERFAMILY Homeodomain-like 194 252 IPR009057 -
Mal3g3618 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 17 341 IPR044848 GO:0003700
Mal3g3618 341 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 196 250 IPR006447 GO:0003677
Mal3g3618 341 MobiDBLite consensus disorder prediction 321 341 - -
Mal3g3618 341 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 17 341 - -
Mal3g3618 341 Gene3D - 195 252 - -
Mal3g3618 341 Coils Coil 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3618 Mal-Chr3 113520019 113522271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3618 185 327 G2-like Transcription Factor Family AT3G04450 39.189 1.60e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal3g3618 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3618 - - mtr:MTR_7g093010 537.339