Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3616 ATGCCTATTTCTGCTGACGTATTAGAACAAATCCTGCCCAAGATTGGAGAATATGCTGAGAAGATGGCCGCAAATAACCATCAAGGTCATAATATGTGGAAGATAGATGTGAGGCTTCATGTCCATACAAGGTATATTGAAGATGATGATGCTGTGAATGCCCTAATTGTTGTGGATGAAATGGATCATCCATCTTGTTACTCTATAGATGAATGTTCAATTTGCTTGGAAGAGCTCTCCAATGGATCAAAGTCACAACATGTTATGACCAAATGTTTGCATGTTTTTCATAGAGAGTGTATGTTCCAATGGGTCAAAAGATGCTTCAGTAGTCGATCATGCCTCTCGTGTCCATTGTGTCGCAATAATAGGATTGTGAATTTTCTTTGA 390 0.3872 MPISADVLEQILPKIGEYAEKMAANNHQGHNMWKIDVRLHVHTRYIEDDDAVNALIVVDEMDHPSCYSIDECSICLEELSNGSKSQHVMTKCLHVFHRECMFQWVKRCFSSRSCLSCPLCRNNRIVNFL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3616 129 Pfam Ring finger domain 70 121 IPR001841 -
Mal3g3616 129 SMART ring_2 72 120 IPR001841 -
Mal3g3616 129 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 125 IPR013083 -
Mal3g3616 129 ProSiteProfiles Zinc finger RING-type profile. 72 121 IPR001841 -
Mal3g3616 129 SUPERFAMILY RING/U-box 71 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3616 Mal-Chr3 113517578 113517967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3616 34 122 C3H Transcription Factor Family AT1G57730 31.461 5.32e-08 47.4