Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3614 ATGCCTATTTCGCCTGACATATTAAAACAAATCCTGCCCAAGATTGGAGAATATGCTGAGAAGATGGTCGCAAATAATCAACAAGGTCATAATATGTGGAAGATAGATGTGAATCTTACAGTCTATACATGCCATATTGAAGATGAAGATGCTGTGAGAGCCCTACTTGTTGTGGATGTAATGGATCATTCATCTTGTTACTTTAGAGATCAATGTTCAATTTGTTTGGAAGAGCTCTCCAATGGATCAAAGCCAGAACATGTTATGACCACCAAATGTTTGCATGTTTTTCATAGAGAGTGTATGTTCCAATGGCTTAAAAGATGCTACAATAGTCAATCATCTCTATCGTGTCCATTGTGTCGCAATAATCGGATTGTGTATTTTCTTTGA 393 0.369 MPISPDILKQILPKIGEYAEKMVANNQQGHNMWKIDVNLTVYTCHIEDEDAVRALLVVDVMDHSSCYFRDQCSICLEELSNGSKPEHVMTTKCLHVFHRECMFQWLKRCYNSQSSLSCPLCRNNRIVYFL* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3614 130 Pfam Ring finger domain 70 122 IPR001841 -
Mal3g3614 130 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 14 122 - -
Mal3g3614 130 SUPERFAMILY RING/U-box 71 125 - -
Mal3g3614 130 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 46 126 IPR013083 -
Mal3g3614 130 PANTHER GB|AAD18119.1-RELATED 14 122 - -
Mal3g3614 130 SMART ring_2 72 121 IPR001841 -
Mal3g3614 130 ProSiteProfiles Zinc finger RING-type profile. 72 122 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3614 Mal-Chr3 113512605 113512997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3614 70 124 C3H Transcription Factor Family AT4G12190 45.455 3.35e-11 53.5