Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal3g3601 | ATGGCTGCAGTTCAGTCATATCAGGATATTGAAGATCACAGCCAAGTTGATGTTGGCGGCGATCATGAACTCTTCGTTGGAGTTTATGATGGCTATAAAGGCGACGCCGCTGCCCTCTATATCAGAGAAAATGTCTTTCCGGCTCTATTGAGGCGTATTCGAGCGAATCATAACAATATGACTGAGAATATTATGAGGCAAGTTATTGAGGAAATGGAGACACGGTTTATGGCGCTTGCTGCAACTAATTATCTGGAACATCAGCAGTCACAGATAGGTTTAGTCAGTTCAGGTTGTTTGATTTGTATTATCTGGAACGGGACACTATATCTCGGAAACGTTGGAGACTCGCTCGCTGTACTTGGTTCTAAGAATGGGCAGGGACAAATTTGCAACAAAGTTGGTGAAAAACATTATGTTAAAGGCTTAAGCGAGACGAGCAGATGTATAGGATATGCATACATGAAGATGGCGCCATTCACCCAAATGAGTTCATTCCAAATCCCACCACAGGAACAAGTGACTCAACCTTATACACAATCTTTGCTATCATCAGAACCAGAGGTTTATTCAAGAGTCTTAAAAGAAAAAGATAGATTCATTATATTTGGATCTTATGGATTTTGGAAATTGATAACACCTAAGGAAGCTGCTAAATTTGCTAACACCTTACCACGAGATGGAATCGCAAAAACACTAGTGACGATTGCTCTGGAGAATATGGCTATTCGACGTGGAAGAAGTTATAGGGACCTTATTGGGATGCCTAGGGGAAACTATGTTAGTGGGAGGGGTGCTAATATACAGGATGGATTTAGACCTTATTATCATGATGATATAACTGTGATTGTTGTATATTTGGATAAAAAGCCAATTAGGGATGATGCAACGATGACGCAATTCGACAATCAGCGTTTGTAG | 921 | 0.4061 | MAAVQSYQDIEDHSQVDVGGDHELFVGVYDGYKGDAAALYIRENVFPALLRRIRANHNNMTENIMRQVIEEMETRFMALAATNYLEHQQSQIGLVSSGCLICIIWNGTLYLGNVGDSLAVLGSKNGQGQICNKVGEKHYVKGLSETSRCIGYAYMKMAPFTQMSSFQIPPQEQVTQPYTQSLLSSEPEVYSRVLKEKDRFIIFGSYGFWKLITPKEAAKFANTLPRDGIAKTLVTIALENMAIRRGRSYRDLIGMPRGNYVSGRGANIQDGFRPYYHDDITVIVVYLDKKPIRDDATMTQFDNQRL* | 307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal3g3601 | 306 | CDD | PP2Cc | 11 | 287 | IPR001932 | - | |
| Mal3g3601 | 306 | Pfam | Protein phosphatase 2C | 21 | 247 | IPR001932 | - | |
| Mal3g3601 | 306 | SMART | PP2C_4 | 3 | 285 | IPR001932 | - | |
| Mal3g3601 | 306 | Gene3D | - | 1 | 129 | IPR036457 | - | |
| Mal3g3601 | 306 | Gene3D | - | 130 | 296 | IPR036457 | - | |
| Mal3g3601 | 306 | PANTHER | ALPHABET, ISOFORM E-RELATED | 129 | 295 | - | - | |
| Mal3g3601 | 306 | PANTHER | ALPHABET, ISOFORM E-RELATED | 3 | 132 | - | - | |
| Mal3g3601 | 306 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 129 | 295 | - | - | |
| Mal3g3601 | 306 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 3 | 132 | - | - | |
| Mal3g3601 | 306 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 287 | IPR001932 | - | |
| Mal3g3601 | 306 | SUPERFAMILY | PP2C-like | 12 | 288 | IPR036457 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal3g3601 | Mal-Chr3 | 113371534 | 113373101 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal3g3601 | 1 | 290 | PP2C-type Phosphatase Gene Family | AT5G06750 | 33.642 | 4.19e-51 | 171 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal3g3601 | K01102 | - | jre:109011952 | 173.711 |