Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3598 ATGATCGATTTCAGAAAATTCAGATTAACATTCACATTTTTCAATCTCACCAATCTTAAACCCTCCATAAACCCTAGATTTTACAGCACAACAGATTCAAAACCCAAACTTCCCTCAAAATCAACAATCAAAGAAGCCCAAGCCGCATTGCTCGAATATCTTCATTCCACAAGAAGCTTGCAGTTTTTAGACGCAGATAACATGTGCAAAAACTCTCCTTTTTTCCTTCAAAATCTCGTCCTCAAAACCCTAAAAAACGAGAAATCGATTAACACAAAGCGATTAATTTCTCGCCACCTGCGTTACCACCCCATTAACGAATTTGAACCCTTTTTCGAGAGTTTGGGTTTGAAGCCTTCTGAATATGAATCTTTGCTTCCCCGTGGTTTGATTTTCCTCAGCGATGATCCTCTTTTGATGGAAAATTATCATACTCTGTGTAACTATGGTGTTCCTCGATCCAAAATGGGGAAAGTTTTCAAACAAGCGCCGCAGGTTTTTAAATTTGAAAATGGGGTTTTGATTTCGAAGATTAAGGCTTATGAAGATTTGGGTGTTTCGGCTTCGATTTTAGTGAATGCTGTTGCTGTAAGTCCAGGGATTTTGGTTGGTGATGTTAATGTTGAGTTTGTTAAGGTTGTGGAGATGTTGAAGAATATTGTTGCAAAGGGTGGTGATGGTGATTTTGATAGTGGTTGGATTGAGTGGAATCTTTTGGATGAGGTTTCTTGTAATTGGGGTTTAATGCTTGAGCTCTTGTGCTTGCTTTCGAATGTTGGTTTCAGTGAGGAACAGTTGGCTAAGATTATTCGTAGTAGTCCTTGTGTTGTTTTTGAGAAATCAGGAGGTAAGACACTCTCCATGATTGGCTTTTTGATGAAATTTGGATTGTCTGTGAACCAGATTGCTCTCTTGTTTCTCGAGTTTCCGCATATTGGGATGCTCAAGTTTTTCGCCAACTTGAGGGTTTGTCTTCAGCTTCTGACTGAAATTGAGATGGAAGCTAAAGAGATTGGAAAGATTTTCCAGTCTCACACATTACTTGTGGGTTCCAACACTCTAAAGACACCTAAGAGTTTGCTTGGTTGCTTGAATGTAGGCAAGAAGCGTTTATGTAGCATACTGCAGGATAATCCTCATGAAATGAAGAATTGGGTTCTTGGAATGAGAGTTAAGCCTATGGTTGGCTTAAGGGATCTGGAAGAGGAGAAATCGAGGGCAGGGAAGACAGAGTTCTTGTTGCGCTTAGGTTATGTGGAAAACACGAAACAAATGAATTCGGCGTTTAAGGTGTTCAGAGGTAAGGGAGCTGAGCTTCAGGAGAGATTTGATTTTATTGTTAAATCTGGATTGACATGTGACGAAGTTTGTAGAATGATTAGAGTTTCACCTCAGATTCTTAATCAGAACACAGATACGGTCAAGATGAAAATTGAGTATCTTGTAAAGAAAGGATATTCTGTATCAGATTTAGTGAGTTTTCCATCATATCTTTCCTATAAATCTCCAAGAGTTAAGCTTAGGTTGTCAATGTATAACTGGCTCGTAGACCGTGGGGTTGTAAATCCCGGGCTTGCTTTGAGCACCATTATTGCATGCACAGATAAAATATTCTTACAAAGTTATGTAAAACGACATCCGTCTGGTCTTCAAGTTTGGGAAGATTTGCAGAAAGAAATTCATTCTGAAGATTAA 1695 0.3894 MIDFRKFRLTFTFFNLTNLKPSINPRFYSTTDSKPKLPSKSTIKEAQAALLEYLHSTRSLQFLDADNMCKNSPFFLQNLVLKTLKNEKSINTKRLISRHLRYHPINEFEPFFESLGLKPSEYESLLPRGLIFLSDDPLLMENYHTLCNYGVPRSKMGKVFKQAPQVFKFENGVLISKIKAYEDLGVSASILVNAVAVSPGILVGDVNVEFVKVVEMLKNIVAKGGDGDFDSGWIEWNLLDEVSCNWGLMLELLCLLSNVGFSEEQLAKIIRSSPCVVFEKSGGKTLSMIGFLMKFGLSVNQIALLFLEFPHIGMLKFFANLRVCLQLLTEIEMEAKEIGKIFQSHTLLVGSNTLKTPKSLLGCLNVGKKRLCSILQDNPHEMKNWVLGMRVKPMVGLRDLEEEKSRAGKTEFLLRLGYVENTKQMNSAFKVFRGKGAELQERFDFIVKSGLTCDEVCRMIRVSPQILNQNTDTVKMKIEYLVKKGYSVSDLVSFPSYLSYKSPRVKLRLSMYNWLVDRGVVNPGLALSTIIACTDKIFLQSYVKRHPSGLQVWEDLQKEIHSED* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3598 564 Gene3D Transcription termination factor 3, mitochondrial 283 557 IPR038538 -
Mal3g3598 564 Gene3D Transcription termination factor 3, mitochondrial 51 223 IPR038538 -
Mal3g3598 564 Pfam mTERF 254 395 IPR003690 GO:0003690|GO:0006355
Mal3g3598 564 Pfam mTERF 432 538 IPR003690 GO:0003690|GO:0006355
Mal3g3598 564 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 27 557 - -
Mal3g3598 564 SMART mt_12 457 487 IPR003690 GO:0003690|GO:0006355
Mal3g3598 564 SMART mt_12 488 521 IPR003690 GO:0003690|GO:0006355
Mal3g3598 564 SMART mt_12 157 187 IPR003690 GO:0003690|GO:0006355
Mal3g3598 564 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Mal3g3598 564 PANTHER CGI-12 PROTEIN-RELATED 27 557 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3598 Mal-Chr3 113264831 113266525 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal3g3598 mTERF 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3598 - - lja:Lj1g3v4317450.1 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3598 3 113264831 113266525 Mal3g3598 3 113264831 113266525 ECH