Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3595 ATGGATTCAGGAGGCAACTCTTCTTCAGAAGAGTCCTCTCTAAATGGCTTAAAATTTGGCCAAAGAATCTATTTTGAAGATACAACTCTTGCTACTACTACTACTACTCCTACTACCATTGCTGTTGGTTCTTCTTCTTCTGGTTCAAAGAAAGGAAGAGGTGGGTCAGTTCAACATTCTCAACCACCTAGGTGTCAAGTTGAAGGGTGTAAAGTAGATCTGAGTGATGCTAAAGCTTACTATTCTAGACACAAAGTTTGTAGCATGCACTCTAAATCCCCTACTGTCACTGTTTCTGGTCTTCAACAAAGATTTTGTCAACAGTGTAGCAGATTTCATCAGCTTGCTGAGTTTGATCAAGGAAAAAGAAGTTGCCGCAGACGACTAGCTGGTCATAATGAGCGTCGCAGAAAGCCCCCACCCAGCTCTCTCTTAACCTCACGTTTTGCCAGGCTTTCTTCATCTGTTTTTGGTAACAACGACAGAGGTGGCAGCTTCTTGATGGAATTTGCCTCAAACCCGAAACATAGTCTGAGAAATTCACTTCCATCACCCGGAAATCAAACCACAACAATCGGTTGGCCTTGGCCGGGGAACACAGAGTCGCCATCTGACAACCTTTTCTTGCAAGGTTCGTCGGGTGGGACAAGCTTCCCTGGTGCCAGGCATCCTCCCGAGGAAACTTACACTGGAGTCACAGATTCAAACTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGGGTTCTCGAAACACAGAACCAAGTCCTGGATTGAATAACATGCTGAATTTCAACGGGACACCCATGACACAACTTGCTACATCTTCTCATGGTGTAGCCATGCATAAAATTCCAAACAATTACGAGGTTGTCCCTGATCTTGGTCGGGGTCACATTTCACAGCCTCTTGGTAGCCAACTCTCTGGTGAGCTTGATCTGTCGCAGCAGGTAAGGAGGCATTATATGGATGTAGAACATTCCAGGGCCTATGAATCTTCTCAATGGTCACTATAA 1014 0.4497 MDSGGNSSSEESSLNGLKFGQRIYFEDTTLATTTTTPTTIAVGSSSSGSKKGRGGSVQHSQPPRCQVEGCKVDLSDAKAYYSRHKVCSMHSKSPTVTVSGLQQRFCQQCSRFHQLAEFDQGKRSCRRRLAGHNERRRKPPPSSLLTSRFARLSSSVFGNNDRGGSFLMEFASNPKHSLRNSLPSPGNQTTTIGWPWPGNTESPSDNLFLQGSSGGTSFPGARHPPEETYTGVTDSNCALSLLSNQTWGSRNTEPSPGLNNMLNFNGTPMTQLATSSHGVAMHKIPNNYEVVPDLGRGHISQPLGSQLSGELDLSQQVRRHYMDVEHSRAYESSQWSL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3595 337 Pfam SBP domain 65 138 IPR004333 GO:0003677
Mal3g3595 337 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 3 334 - -
Mal3g3595 337 MobiDBLite consensus disorder prediction 36 63 - -
Mal3g3595 337 MobiDBLite consensus disorder prediction 36 64 - -
Mal3g3595 337 Gene3D - 55 126 IPR036893 GO:0003677|GO:0005634
Mal3g3595 337 ProSiteProfiles Zinc finger SBP-type profile. 62 139 IPR004333 GO:0003677
Mal3g3595 337 SUPERFAMILY SBT domain 63 144 IPR036893 GO:0003677|GO:0005634
Mal3g3595 337 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 3 334 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3595 Mal-Chr3 113149748 113153016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3595 17 337 SBP-box Gene Family AT3G57920 41.160 2.52e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal3g3595 SBP 6.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3595 - - gmx:100807165 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3595 3 113149748 113153016 Mal3g3595 3 113149748 113153016 ECH
Mal3g3595 3 113149748 113153016 Mal1g3658 1 68852325 68856213 PCT