Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3594 ATGATTCGTAACTTCCTTTACCAGCTTCTCAATCTCGTTGTTTTCTCCTCAATTTTGATTTCTCAGAGCTTAGCGTTAACTCGTTCACCCGAAGTATGGGCACTACAGGATCTACACAGGGCGTTGAATTACTCGGAGGCACTTCGAGGATGGAATGGTAGTGATCCTTGTGAGGAGTCTTGGACGGGTGTTGCTTGTTCTGGGTCGTCGGTTATACGTCTAAACATTCAAGGGTTAAACCTCACTGGGAGTCTATGCAGGCTTTATAATCTACGAAATTTGAAGCAGCTTGATGTCAGTTCTAATAACATAGTGGGCGAAATACCGTTTGGTTTACCACCCAATGTCACACATATGAATTTAAGCCACAATTTCTTAGTTGGACCCATTGGTGACGTATTTACTGGCTTAGATAATCTCAAAGAAATGTTCTTGCATAATAACAAATTCACTGGATCAGTTACCTACCTGGCCGAACTTCCACTTACAGATTTGAACATTCAAGATAATCTGTTTAGTGGCCTTCTTCCACATCATTTTCAGCACATAAAAAATTTATGGATTGGTGGGAATAGATTCCATGCAGCGGACAACTCTCCTCCATGGGCTGCTCCTTTGGAGACATTATCAGTTGAACATAATATTAGTCGCCCACCCACAACTAATGCAAGTGCCATCAAGAACAAGAACTATGCTCCTCCCAAAGTAAGTGAGCACAAGCATAAGAAGAAAAAATTAGGTCCTGGAGCAATTGCTTTTATAGTTGGTGGAGGAACACTAATGGCTACAGGTGTTGCACTCCTTGTTGCAATCCGCTTGAACAAACTGCATGCTCTAAGCCAGAACTTAAATTACTCAGAAAGCAATGATATCTCTTTGCATTCTCATCCAACCAGTGCAAGCATAGAGGTCTCTTCTGCCGAACTAGACGACATGCCACTACTGCCAACTGTTAACAAGGCACCTATTTTGGGTCCGATGAGATTTCCTTTCCTGAACAATAACAAGGTGGAGGAAACATCAAGAAGAAGTTTTGCCAAAAGAGGCAGATCCACTGGAAGGACGAAAATCTATACCATAGCGGAGCTTCAGCTGGCTACTAACTTCTTCAATGAAGGCAACCTTCTGGGAGAGGGATCTCTTGGTCCTGTTTACAAAGCTGTATTTCCTGATGGCAAAAATTTGGCCGTGAAGATCATAAACATGGCGGGTCTGTCTTACAGAGAAGAGGAAAGGTTCTTGGATGTCATTTGCACGGCTTCCAAACTGAAGCACCCCAATATCATACCACTCAATGGTTACTGTTTGGAGCACGGAGAGCATCTTCTTGTTTACGATTACTTTGGACATTTAACTCTAAATGATGCCCTTCACAGTGGAACATGCGAACCACTATCGTGGGTCCAACGTCTTCAGATTGCTTTAGGTGTTGCTCAGGCTCTAGACTATTTGCACTCGGCGTGCTGCCCTCCCGTGGCCCATGGTAACTTGAAGGCTGCCAATGTTCTACTGGATGAAAATTTGATGCCTCGTGTTGGTGACTGTAGCTTGGCTATTTTGAGACCGCTGATGAAAAGCAATCAAGTTAAAGCTCCAGCTACTGAGACTACAGCAGCAGAGAGAGGCTATGTTCCACCTGACCATGGTCAAACAGGATTCAGCAGAAGGAGAGATGTATTTGCCTTTGGGGTATTGCTTCTAGAATTGTTAACAGGAAGGAAACCTTTCGATAGTTCAAGGCCAAGGGAAGAGCAAAATCTGGCAAAATGGGTTTCCCACAGGCTTCGTGATAACGTGGGTTTGGAACAGATAGTGGATCCCAGTATGAAAACAACATTGTCATCCAAGGCTCTTTCTGGTTATGCTGATATCATCTCCCTCTGTATGCAGCCTTCAAAACAACTCCGTCCCCCAATGTCTGAAGTTGTGAACTCACTTGTATCATTTTCCCAAAAGTTCAACTTTGCAAAGAGTGGTGTAGCAGATGGTACTGATCTATTTGAGAAGTCTTCTTTCTGTTCAGCCAACACACGCTTTATAAGTTCACCAACAACGAGCCACTTATCAGCCTGA 2073 0.4356 MIRNFLYQLLNLVVFSSILISQSLALTRSPEVWALQDLHRALNYSEALRGWNGSDPCEESWTGVACSGSSVIRLNIQGLNLTGSLCRLYNLRNLKQLDVSSNNIVGEIPFGLPPNVTHMNLSHNFLVGPIGDVFTGLDNLKEMFLHNNKFTGSVTYLAELPLTDLNIQDNLFSGLLPHHFQHIKNLWIGGNRFHAADNSPPWAAPLETLSVEHNISRPPTTNASAIKNKNYAPPKVSEHKHKKKKLGPGAIAFIVGGGTLMATGVALLVAIRLNKLHALSQNLNYSESNDISLHSHPTSASIEVSSAELDDMPLLPTVNKAPILGPMRFPFLNNNKVEETSRRSFAKRGRSTGRTKIYTIAELQLATNFFNEGNLLGEGSLGPVYKAVFPDGKNLAVKIINMAGLSYREEERFLDVICTASKLKHPNIIPLNGYCLEHGEHLLVYDYFGHLTLNDALHSGTCEPLSWVQRLQIALGVAQALDYLHSACCPPVAHGNLKAANVLLDENLMPRVGDCSLAILRPLMKSNQVKAPATETTAAERGYVPPDHGQTGFSRRRDVFAFGVLLLELLTGRKPFDSSRPREEQNLAKWVSHRLRDNVGLEQIVDPSMKTTLSSKALSGYADIISLCMQPSKQLRPPMSEVVNSLVSFSQKFNFAKSGVADGTDLFEKSSFCSANTRFISSPTTSHLSA* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3594 690 Gene3D Transferase(Phosphotransferase) domain 1 450 667 - -
Mal3g3594 690 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 160 690 - -
Mal3g3594 690 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 154 - -
Mal3g3594 690 SUPERFAMILY Protein kinase-like (PK-like) 350 646 IPR011009 -
Mal3g3594 690 SUPERFAMILY L domain-like 46 214 - -
Mal3g3594 690 PANTHER OS01G0253100 PROTEIN 160 690 IPR045271 GO:0004714|GO:0006468
Mal3g3594 690 PANTHER OS01G0253100 PROTEIN 2 154 IPR045271 GO:0004714|GO:0006468
Mal3g3594 690 Pfam Protein kinase domain 371 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3594 690 ProSiteProfiles Protein kinase domain profile. 370 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3594 690 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Mal3g3594 690 Gene3D Phosphorylase Kinase; domain 1 332 447 - -
Mal3g3594 690 Gene3D Ribonuclease Inhibitor 31 217 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3594 Mal-Chr3 113142239 113147603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3594 8 690 Strubbelig Receptor Gene Family AT5G06820 48.313 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mal3g3594 Pkinase 3.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3594 - - gmx:100775254 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3594 3 113142239 113147603 Mal3g3594 3 113142239 113147603 ECH
Mal3g3594 3 113142239 113147603 Mal1g3672 1 69697321 69703057 PCT