Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3587 ATGGCTTCAAGTGTTAAAAAACCAAACCAAACCACTACTCAACTAGAACCACTCCCACCACCTCAACACCGTCATCATCAAATTCATCATCAACAATTACGTGACAATAATCAAATTTCTTTTGGAATGATGCAATCTTCTTCATCACCCTCTGTCCCTGCAAATTACATAAATAAAGATTCTGGAGCTTATGATTTGGGTGAATTGGATCAAGCACTTTTTCTCTATCTTAATGGACAAACTGACCCATCCAGTGTTCAAGACCAAAAACAACAGAATTCAACATCAGGAATGAGACCACCAACTCTCAACATTTTTCCTTCTCAGCCTATGCATGTAGAGCCATCTTCATCCAATTCAAAGGCTAGCATGGAGTTAGTTTCTCCGCAAACAAGTGGATCAAAGAGAGGATCAGAGCCATCCAAAGCTGTTAAGCGAGAGAAAAACCATGGAAAAGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCTAAGATACTTAGAAGACTTGCTCAGAATAGAGAAGCGGCTAGAAAAAGCAGGCTTAGAAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATTAAGCTTAATCAGATGGAACAGGAGCTACAACATGCTAGAAATCAAGGCATGTTCTTTGGTGGAAGTGCAATTTTGGGAGGAGAACAAGGCCTTCCCTCTATGAATAGCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAATATACAAGGTGGCTTGAGGAGCACCACCGTTTAGTATGTGAACTAAGAGCTGCAGTTCAAGAACACATTCCTGAGAATGAACTTAGAATGTTTGTGGACAAATTCCTAGCTCAATATGATCAAATAGTTCATCTAAAGAGCTTAGTTGCAAAAGCAGATATATTTCATCTTGTTAATGGCATGTGGGTTACCCCAATTGAACGTTGCTTCATGTGGATTGGTGGATTTAAGCCTTCTGAACTCATTAAGATTATTGTGAGTCAAATTGAACCATTGACCGAGCAACAAATAATGGGTATATATGCATTGCAACAATCTACACAACAAGGAGAAGATGCTCTCTCTCAAGGACTTGAGGCTCTTAATCAATCTCTTTCTGAAACTATAACATCAGATTCATTGAGCTATCCTCCAAATATGACTAACTACATGGACCAAATGGCAAGAGCCATGAACAAACTCTCCACTCTTGAAAGTTTCATAAGAGAGGCAGATAATCTTCGGCACCAAACCATTCACCGTCTGAATCAAATCCTAACAGCTCGTCAAGCAGCAAGGTGTTTTCTTGCCATGGCTGAGTACTTCCATCGTATGCGAGCTTTGAGTTCTCTGTGGTTGGCACGCCCTCGTCAAGAATAG 1380 0.4043 MASSVKKPNQTTTQLEPLPPPQHRHHQIHHQQLRDNNQISFGMMQSSSSPSVPANYINKDSGAYDLGELDQALFLYLNGQTDPSSVQDQKQQNSTSGMRPPTLNIFPSQPMHVEPSSSNSKASMELVSPQTSGSKRGSEPSKAVKREKNHGKGPTSSSEHEGPKTPDPKILRRLAQNREAARKSRLRKKAYIQQLESSRIKLNQMEQELQHARNQGMFFGGSAILGGEQGLPSMNSISSEAAMFDVEYTRWLEEHHRLVCELRAAVQEHIPENELRMFVDKFLAQYDQIVHLKSLVAKADIFHLVNGMWVTPIERCFMWIGGFKPSELIKIIVSQIEPLTEQQIMGIYALQQSTQQGEDALSQGLEALNQSLSETITSDSLSYPPNMTNYMDQMARAMNKLSTLESFIREADNLRHQTIHRLNQILTARQAARCFLAMAEYFHRMRALSSLWLARPRQE* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3587 459 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 210 IPR004827 GO:0003700|GO:0006355
Mal3g3587 459 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Mal3g3587 459 MobiDBLite consensus disorder prediction 1 28 - -
Mal3g3587 459 Pfam Seed dormancy control 259 334 IPR025422 GO:0006351|GO:0043565
Mal3g3587 459 Gene3D - 169 217 - -
Mal3g3587 459 MobiDBLite consensus disorder prediction 139 170 - -
Mal3g3587 459 MobiDBLite consensus disorder prediction 1 18 - -
Mal3g3587 459 CDD bZIP_HBP1b-like 169 221 - -
Mal3g3587 459 Coils Coil 188 215 - -
Mal3g3587 459 MobiDBLite consensus disorder prediction 82 170 - -
Mal3g3587 459 MobiDBLite consensus disorder prediction 82 138 - -
Mal3g3587 459 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 76 458 - -
Mal3g3587 459 ProSiteProfiles DOG1 domain profile. 241 455 IPR025422 GO:0006351|GO:0043565
Mal3g3587 459 Pfam bZIP transcription factor 169 205 IPR004827 GO:0003700|GO:0006355
Mal3g3587 459 PANTHER TRANSCRIPTION FACTOR TGA9 76 458 - -
Mal3g3587 459 SUPERFAMILY Leucine zipper domain 170 213 IPR046347 GO:0003700|GO:0006355
Mal3g3587 459 SMART brlzneu 165 250 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3587 Mal-Chr3 113093140 113099070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3587 54 459 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 60.633 2.76e-177 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal3g3587 DOG1 1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3587 K14431 - gmx:100799713 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3587 3 113093140 113099070 Mal1g3680 1 70041155 70050500 PCT