LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal3g3571	ATGGAACAAACTATAGTAGGATTAAGTGGATCCATTCACGACGATTCTGTTCAATTTAACGAAGAAATCCAAGGAATTATGGTTCCGGCGCCGGCACCGGAAAACGCTAGCTCATTCACCGCGCTTCTGGAGCTTCCGCCGACGCAGGCCGTAGAGCTTCTTCATTTGCCTGAGCAAAAACCCTATCTTCCGAACTCTTCTAACGGAAATTTGACTTTTCCTACAAACGCCGCGTTGATTGAACGCGCCGCGAAATTCTCAGTGTTCGCCGGAGAGAATTCTTCGCCGGGAGAGTCGCGATTGTTTCCGGTGGAAAGTGTGAAGAACGAGCCTCAAGAGTCTGATTCGAACCCTTGCTCGACGCAAGAGTGCGTTTCGGATCCAGCAGTGAATAAGAATCAGAGAAACGTGAAGAGAAAAGAGCGAGAGAAGAAGGGTAAAGCGTCGTCGTCGAAGAAGAGTAAGAGCGTCGCCGATGAATCCTCCGGTGACGGTGAGAAGCTTCCGTACGTCCACGTTCGCGTTCGACGGGGTCAAGCCACTGATAGCCATAGCTTGGCAGAACGAGCTAGGAGAGAGAAAATTAATGCTCGCATGAAGCTTTTACAAGAGCTGGTCCCAGGATGCAACAAGATATCTGGAACGGCATTGGTTCTGGATGAAATCATCAATCATGTGCAAACTCTACAACGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATTGATTTCAACTTAGACAGGTTATTGGCTACTGATGGGTCATCTTTAATGGACAGTAACTTACCTACCATGGTTACGCCTCTTGTGTGGCCAGAAATCCCACTCAACAGTAACAGACAGCATTATCAACAACAGTGGCAATTTGATGCATTCCATCAACCGCTCTGGGGAAGGGAAGAAGACAATCATAATTTCACGACTCCAGAAAACTCACTTTTGAGTTATAACTCCTCAGCAAATTCAGCATCTCTGCACTCAAATCAATTGAAGATGGAGCTCTGA	1020	0.4686	MEQTIVGLSGSIHDDSVQFNEEIQGIMVPAPAPENASSFTALLELPPTQAVELLHLPEQKPYLPNSSNGNLTFPTNAALIERAAKFSVFAGENSSPGESRLFPVESVKNEPQESDSNPCSTQECVSDPAVNKNQRNVKRKEREKKGKASSSKKSKSVADESSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQTLQRQVEILSMKLAAVNPRIDFNLDRLLATDGSSLMDSNLPTMVTPLVWPEIPLNSNRQHYQQQWQFDAFHQPLWGREEDNHNFTTPENSLLSYNSSANSASLHSNQLKMEL*	340

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mal3g3571	339	Gene3D	-	176	249	IPR036638	GO:0046983
Mal3g3571	339	MobiDBLite	consensus disorder prediction	133	169	-	-
Mal3g3571	339	SMART	finulus	185	235	IPR011598	GO:0046983
Mal3g3571	339	MobiDBLite	consensus disorder prediction	109	132	-	-
Mal3g3571	339	Pfam	Helix-loop-helix DNA-binding domain	183	230	IPR011598	GO:0046983
Mal3g3571	339	PANTHER	STEROL REGULATORY ELEMENT-BINDING PROTEIN	15	339	IPR024097	GO:0006355
Mal3g3571	339	Coils	Coil	219	239	-	-
Mal3g3571	339	PANTHER	TRANSCRIPTION FACTOR BHLH FAMILY-RELATED	15	339	-	-
Mal3g3571	339	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain profile.	179	229	IPR011598	GO:0046983
Mal3g3571	339	MobiDBLite	consensus disorder prediction	92	169	-	-

Showing 1 to 10 of 12 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal3g3571	Mal-Chr3	112912356	112918129	Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal3g3571	15	339	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT3G57800	51.499	9.13e-100	297

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bHLH	Mal3g3571		HLH	1.7e-05	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal3g3571	-		-	gmx:100814124	491.886

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal3g3571	3	112912356	112918129	Mal3g3571	3	112912356	112918129	ECH
	Mal3g3571	3	112912356	112918129	Mal1g3716	1	71275766	71280347	PCT

Showing 1 to 2 of 2 entries