Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3565 ATGGCTACTACATTCTGTATATTCCTATTCCTTCTTTCTCTAACCTTCACAATCTTCAACCTCACTTCATCTTCTTCAGAAGTTGATACTCTTCTTTCCTTCAAATCCACCATTCAAGACTCCAAAAAAGCTTTATCAACTTGGTCAAACACTTCATCAAACCATTTCTGTAACTGGACTGGTATCTCTTGTTCTTCCACTACACCTTCTGATTCACTCTCAGTAACTTCTGTTAATCTTCAAAACTTAAACCTCTCTGGTGATATATCTTCTTCTATATGTGACCTTCCAAATCTCTCTTATCTTAACCTTGCTAATAACATCTTCAACCAACCTATTCCACTTCATCTTTCTCAATGTAGCTCATTGAAAAGTTTGAATCTTAGTAATAATCTTATTTGGGGAACTATCCCTTCTCAGATTTCTCAGTTTGTTTCTTTGTCAGTGCTTGATTTGAGTAGAAACCATATAGAAGGAAATATTCCAGATAGTTTAGGTTCATTGAAGAATCTTGAAGTGCTTAACATGGGAAGTAACTTGCTTTCTGGTGATGTACCTAAGGTTTTTGGTAACTTGACTAAGCTAGAAGTTCTTGATTTATCTATGAATCCTTACTTGGTGAGTGAGATTCCAGAAGATGTTGGTGAGCTTGGAAATCTAAAGCAACTTTTGTTGCAGGGTTCTTCTTTTCAAGGTGATGTTCCTGAGTCTTTGAAGGGTTTGATTAGTTTAACTCATTTAGATCTCTCTGAGAATAATCTAACTGGTGAAGTTTCAAATACTCTTGTAACTTCTCTTAAGAACTTGGTTTCTTTTGATGTTTCACAAAACAAGCTTTTAGGTTCATTTCCAAGTGGTATTTGTAAAGGAAAAGTGCTTATAAATCTGAGTCTTCATACTAATAGATTCACTGGTTTGATACCAAACTCAACTAGTGAATGTATGAGTCTTGAGAGATTTCAAGTTCAGAACAATGGTTTCTCTGGAAATTTCCCTTTTGTGTTATTTTCACTTCCTAAAATTAAGCTTATTAGAGGTGAAAACAATAGATTCACAGGACAAATACCTGAGTCAATTTCAGAAGCTACTCAGTTAGAGCAAGTTCAGCTTGATAACAATCTTTTAGATGGTGAAATTCCTTCAGGTCTTGGCTTTGTTAAAAGCTTATATAGATTTTCAGCTTCTCTTAATCATTTTTATGGTGAACTTCCTCCAAATTTTTGTGACTCACCAGTTATGAGTATAGTGAATCTCTCTCACAATTCTCTTTCTGGTTCTATTCCTCAGCTGAAAAAATGCAGGAAACTAGTTTCACTTTCTTTAGCTGATAATAGTTTAACAGGAGAAGTTCCAAATTCTCTTGGTGAACTACCTGTGCTTACTTATCTTGATCTTTCTGATAACAATCTCACTGGTTCAATCCCACAAGGGCTTCAAAACTTGAAACTTGCTCTTTTCAATGTTTCCTTCAATCAGTTATCAGGTAGAGTACCATACTCATTGATTTCTGGTCTTCCTGCTTCTTTTTTGGAAGGAAATTCTGGTCTTTGTGGCCCTGGATTGCCTAATTCATGTTCTGGTGATGACAAGCCAAAACACCAAGCTGCTTCTGGTTTAACAACCTTAACATGTGCTTTGATCTCTCTAGCATTTGTTGCTGGAACTGTCCTTGTTGCTGTTGGATTTATACTGTATAGGAGATCTTGCAAAGGGAATGAAGTAGCGGTGTGGCGCTCGGTGTTCTTCTATCCACTCAGAATTACTGAGCATGATCTTGTTATAGGGATGAATGAGAAAAGCTCAATAGGAAATGGAGTTTTTGGTAATGTTTATGTTGTGAGTTTACCAAGTGGTGATTTAGTATCTGTGAAAAAGTTGGTTAAATTTGGAAACCAGTCTTCAAAGAGTTTGAAAGTTGAGGTCAAAACTTTGGCTAAAATTAGGCATAAGAATGTTGTTAAGATTCTTGGATTCTGCCATTCCGATGAGTCGGTTTTTCTTATTTATGAGTACTTGCATGGTGGAAGCTTAGGGGACTTGATTTCTAGTCAGAATTTTCAGTTGAATTGGGGAATTAGATTGAAGATTGCTATTGGAGTTGCTCAAGGACTTGCATATCTTCACAAGGACTATGTACCACACTTGGTTCATAGAAATGTCAAGTCAGAGAACATTCTTTTGGATGTTAACTTTGAGCCAAAATTGACACATTTTGCTCTTGATAGAATTGTTGGAGAAGCTGCATTTCAATCAACTTTGGATTCTGAAGCTGCATCTTCTTGTTACATTGCTCCAGAATATGGTTACAATAAGAAAGCAAGTGAACAATTGGATGTATACAGCTTTGGTGTTGTATTGCTAGAGCTAGTTTGTGGAAGACAAGCAGAGCAAAAAGATTCAAGTGACTCCTCTTCACTTGACATAGTGAAATGGGTTAGAAGAAAAGTGAACATTACTAATGGGGTGCACCAAGTTCTTGACACTAGAATATCACATACTTGTCACCAAGAAATGGTTGGTGCTTTAGATATTGCTCTAAGTTGCACTTCTGTGGTACCTGAGAAAAGGCCATCAATGTTTGAAGTTGTTAGAGGTCTTCAGTCCCTTGAGTCAAGGACTTATCTTGCAAATTTGCAGGGTCCAAATGATGAACCCTCTATTCCAGTTTGA 2670 0.3652 MATTFCIFLFLLSLTFTIFNLTSSSSEVDTLLSFKSTIQDSKKALSTWSNTSSNHFCNWTGISCSSTTPSDSLSVTSVNLQNLNLSGDISSSICDLPNLSYLNLANNIFNQPIPLHLSQCSSLKSLNLSNNLIWGTIPSQISQFVSLSVLDLSRNHIEGNIPDSLGSLKNLEVLNMGSNLLSGDVPKVFGNLTKLEVLDLSMNPYLVSEIPEDVGELGNLKQLLLQGSSFQGDVPESLKGLISLTHLDLSENNLTGEVSNTLVTSLKNLVSFDVSQNKLLGSFPSGICKGKVLINLSLHTNRFTGLIPNSTSECMSLERFQVQNNGFSGNFPFVLFSLPKIKLIRGENNRFTGQIPESISEATQLEQVQLDNNLLDGEIPSGLGFVKSLYRFSASLNHFYGELPPNFCDSPVMSIVNLSHNSLSGSIPQLKKCRKLVSLSLADNSLTGEVPNSLGELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNQLSGRVPYSLISGLPASFLEGNSGLCGPGLPNSCSGDDKPKHQAASGLTTLTCALISLAFVAGTVLVAVGFILYRRSCKGNEVAVWRSVFFYPLRITEHDLVIGMNEKSSIGNGVFGNVYVVSLPSGDLVSVKKLVKFGNQSSKSLKVEVKTLAKIRHKNVVKILGFCHSDESVFLIYEYLHGGSLGDLISSQNFQLNWGIRLKIAIGVAQGLAYLHKDYVPHLVHRNVKSENILLDVNFEPKLTHFALDRIVGEAAFQSTLDSEAASSCYIAPEYGYNKKASEQLDVYSFGVVLLELVCGRQAEQKDSSDSSSLDIVKWVRRKVNITNGVHQVLDTRISHTCHQEMVGALDIALSCTSVVPEKRPSMFEVVRGLQSLESRTYLANLQGPNDEPSIPV* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3565 889 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Mal3g3565 889 Gene3D Ribonuclease Inhibitor 216 534 IPR032675 -
Mal3g3565 889 SUPERFAMILY L domain-like 24 288 - -
Mal3g3565 889 SUPERFAMILY Protein kinase-like (PK-like) 598 865 IPR011009 -
Mal3g3565 889 Gene3D Transferase(Phosphotransferase) domain 1 672 880 - -
Mal3g3565 889 PANTHER OSJNBB0022F23.6 PROTEIN 8 876 - -
Mal3g3565 889 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 876 - -
Mal3g3565 889 ProSiteProfiles Protein kinase domain profile. 596 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3565 889 Pfam Leucine rich repeat 219 279 IPR001611 GO:0005515
Mal3g3565 889 Pfam Leucine rich repeat 146 203 IPR001611 GO:0005515
Mal3g3565 889 Gene3D Ribonuclease Inhibitor 23 206 IPR032675 -
Mal3g3565 889 ProSiteProfiles Leucine-rich repeat profile. 459 482 IPR001611 GO:0005515
Mal3g3565 889 ProSitePatterns Protein kinases ATP-binding region signature. 602 625 IPR017441 GO:0005524
Mal3g3565 889 PRINTS Leucine-rich repeat signature 244 257 - -
Mal3g3565 889 PRINTS Leucine-rich repeat signature 457 470 - -
Mal3g3565 889 Gene3D Phosphorylase Kinase; domain 1 590 671 - -
Mal3g3565 889 SMART LRR_typ_2 266 290 IPR003591 -
Mal3g3565 889 SMART LRR_typ_2 192 217 IPR003591 -
Mal3g3565 889 SMART LRR_typ_2 96 120 IPR003591 -
Mal3g3565 889 SMART LRR_typ_2 457 480 IPR003591 -
Mal3g3565 889 SMART LRR_typ_2 121 144 IPR003591 -
Mal3g3565 889 SMART LRR_typ_2 241 265 IPR003591 -
Mal3g3565 889 SMART LRR_typ_2 168 191 IPR003591 -
Mal3g3565 889 Pfam Leucine Rich Repeat 460 481 IPR001611 GO:0005515
Mal3g3565 889 Pfam Protein kinase domain 597 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3565 889 SUPERFAMILY L domain-like 208 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3565 Mal-Chr3 112871683 112874773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3565 27 869 Receptor kinase-like Gene Family AT5G06940 62.411 0.0 1021
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal3g3565 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3565 - - gmx:100794428 1408.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3565 3 112871683 112874773 Mal3g3565 3 112871683 112874773 ECH