Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3564 ATGGCGCCGAGCAAGAAATCTAGGGTTTCCGACGATGAAGAAATGGAAGATCAACCTCAAAAGAGTCTCTACCAGGTTCTTGGTTTGGGGAAAACGGCCTCTCAACAAGAAATAAAAAAGGCCTATTACAAATTGGCATTGCGGCTCCATCCGGATAAGAATCCCGGTGATGAGGAGGCTAAAGAGAAATTCCAACAATTGCAAAAAGTTATTTCCATTCTTGGGGATGTAGAGAAACGAGCCCTTTATGATCAGACTGGTTGTATTGATGATGATGATCTGGCAGGAGATGTTCAGAATCTTCACGCTTTTTTCAAAACAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTACAGGGGTTCTGACTCAGAGAAAAATGATTTGATTGAGCTGTTCAAGAAGTACAAGGGGAATATGAACAGACTTTTTTGTTCAATGCTTTGTTCAGATGCTAAACTTGACTCACACCGATTCAAGGACATTCTTGACGAGGCTATAGCTGCTGGAGAACTAAAAGCAACAAAAGCCTACCAGAAATGGGCTAAGGAAGTATCAGAAACCAAACCACCCACAAGTCCTTTAAAGAGGAAGGCAAAGTCAAATAAGCAGTCTGAAACAGATCTATGTGCAGTCATATCACAACGTCGAAATGAGAGGAAAGGTCAGTTTGATTCAATGTTCGCGTCTCTAGTATCAAAGTATGGTGGAAGTGACATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTGCACAGAAAAAGCTGGAAAAGGGAAGATCCTCAAAAAAATCAAAGCAATCAAAGCGAAAGTAA 828 0.4118 MAPSKKSRVSDDEEMEDQPQKSLYQVLGLGKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDVEKRALYDQTGCIDDDDLAGDVQNLHAFFKTMYKKVTEADIEEFEANYRGSDSEKNDLIELFKKYKGNMNRLFCSMLCSDAKLDSHRFKDILDEAIAAGELKATKAYQKWAKEVSETKPPTSPLKRKAKSNKQSETDLCAVISQRRNERKGQFDSMFASLVSKYGGSDMPEPSEEEFEAAQKKLEKGRSSKKSKQSKRK* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3564 275 ProSiteProfiles dnaJ domain profile. 22 87 IPR001623 -
Mal3g3564 275 MobiDBLite consensus disorder prediction 188 213 - -
Mal3g3564 275 MobiDBLite consensus disorder prediction 240 275 - -
Mal3g3564 275 Gene3D DnaJ domain 6 100 IPR036869 -
Mal3g3564 275 SUPERFAMILY Chaperone J-domain 20 93 IPR036869 -
Mal3g3564 275 MobiDBLite consensus disorder prediction 195 209 - -
Mal3g3564 275 PRINTS DnaJ domain signature 79 98 IPR001623 -
Mal3g3564 275 PRINTS DnaJ domain signature 59 79 IPR001623 -
Mal3g3564 275 PRINTS DnaJ domain signature 42 57 IPR001623 -
Mal3g3564 275 PRINTS DnaJ domain signature 24 42 IPR001623 -
Mal3g3564 275 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 5 271 IPR042977 -
Mal3g3564 275 MobiDBLite consensus disorder prediction 1 19 - -
Mal3g3564 275 Pfam DnaJ domain 23 84 IPR001623 -
Mal3g3564 275 SMART dnaj_3 21 79 IPR001623 -
Mal3g3564 275 MobiDBLite consensus disorder prediction 1 21 - -
Mal3g3564 275 CDD DnaJ 24 76 IPR001623 -
Mal3g3564 275 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 5 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3564 Mal-Chr3 112859406 112862705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3564 24 84 C2H2 Transcription Factor Family AT1G74250 40.909 2.22e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3564 K09529 - gmx:100793909 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3564 3 112859406 112862705 Mal3g3564 3 112859406 112862705 ECH
Mal3g3564 3 112859406 112862705 Mal1g3731 1 72165354 72169030 PCT