Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3563 ATGGAGATAGAGAAATGTGAGATGAAGTCAAAGAAGATGGAAGAATATGAAGTGATTGAACAAATTGGTAGAGGAGCATTTGGTTCTGCTTTTCTTGTTCTTCATAAGTCTCAGAAAAAGAGGTATGTGTTGAAAAAGATTCGTTTGGCTAAGCAGACAGAGAAGTTCAAACGAACAGCACACCAAGAGATGAATCTGATTGCAAAACTAAATAACCCATATATTGTGGATTACAAAGATGCTTGGGTGGACAAGGAGGATCATGTATGCATTATAACTGGCTACTGTGAAGGAGGTGACATGGCTGAGAGTATTAAGAAAGCTCGAGGATCATTTTTCCCCGAGGAGAAGGTCTGCAAATGGCTAACTCAATTGTTGATAGCTGTAGACTACTTGCACTCTAACCGTGTAATCCACAGGGATCTTAAGTGTTCCAACATATTCCTCACCAAAGACAACAATATTCGGCTTGGTGATTTTGGTCTTGCAAAGCGACTTAATGGAGAAGACCTCACTTCCTCGGTCGTTGGAACACCAAATTACATGTGTCCTGAGCTCCTCGCAGACATACCATATGGTTATAAATCTGATATATGGTCACTTGGTTGCTGTATGTTTGAGATTGCTGCACATCAACCAGCATTTCGTGCTTCGGACATGGCTGGACTTATCAATAAAATAAACAGATCCTCCATTTCTCCACTGCCAATTGTTTATTCTTCCACACTGAAACAAATTATCAAGAGCATGCTAAGGAAAAGTCCAGAACATAGGCCAACAGCTGCCGAATTGTTAAGACATCCACATTTACAACCTTACGTTCTTCGCTGTCAGAATGCATCATCTAATTTTCTTCCAATATATCCCATAGTTAACTCAAAGGATAAAACAAAAAGATCTCCAAAATCTAAGGACAGAGAAATGGGATTAGTAAATCGTTTGGAACGGGTACATCCGATTGAGGGAAATGGTGATGTACAACAGAGAAGCAATCATCTTAACAATGGCGAGGTAACAATCTCAACCAGTACAGAAGTCAACCTTGAGACCAAGATGTTTAATCTTACTGGCTACATAGTTGAATCGTCTACTAGTGTTAGCGGCTCGAAAGATGGTTCAACAACATCCGAATCAACTACTTGCAGCGTGTGCAAGGAGGACTACAGATTTAGACCATCAAGGTTAATAGCTAACAATGCGATCACCTCAAAGAGCATACAAGATTCTCTGCATGAAGAAGAACAAGGATTTGCTGCAGAACATTTTCAGAAATCAGCGGCCACCAAAGTTGAAAATACATTCTTGAGTGAAGGTTTTTATAGTGCTGAAGCAAATAGGGAAGATGCCAAACTTGAGGACCTTAGGAAATCAACTATTTCCAGTGCGAGCAATAGCAGCATGGACAAAAACATTTCCGTTAACGAGGAAAGTTCGTCGCTAATTATGCATCCTCTCATGGTTGAACATGACAGCACTGCATCTGAAGACTGCACGAAGAAAAATGAAAACCCTGATTCCTTTACAGAAGAAGGCTCGCATATGAACTGCTTGTCGTCCGAGAGTTGTGATAATCATAATACTGATACACTTGCAGCGAAGAATAATGACGTAGCAAAACAATGCATTATTTGCTCAACACAGAAAGAAGATGATAATGTAACACCAAATGGAATTTCATTGAGTGTAGTTACTGCAACAGATGGTGGTGGTGACGATGACGAAGCAATCAATAATGCGTTGGATAGTCCTTGCCAGGAAAGAGCTGATGCATTGGAGTCTCTACTTGAGTTATGTGCTCAGCTACTTAAACAAGATAAACTTGAAGAACTTGCTGGTGTGCTGAGACCATTTGGTAAAGAAGCTGTATCATCAAGAGAAACTGCAATATGGTTAACAAAGAGCCTCATATCTGCTCAAAAGTTTAACCCTGAAAACTAG 1938 0.4009 MEIEKCEMKSKKMEEYEVIEQIGRGAFGSAFLVLHKSQKKRYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVDYKDAWVDKEDHVCIITGYCEGGDMAESIKKARGSFFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNNIRLGDFGLAKRLNGEDLTSSVVGTPNYMCPELLADIPYGYKSDIWSLGCCMFEIAAHQPAFRASDMAGLINKINRSSISPLPIVYSSTLKQIIKSMLRKSPEHRPTAAELLRHPHLQPYVLRCQNASSNFLPIYPIVNSKDKTKRSPKSKDREMGLVNRLERVHPIEGNGDVQQRSNHLNNGEVTISTSTEVNLETKMFNLTGYIVESSTSVSGSKDGSTTSESTTCSVCKEDYRFRPSRLIANNAITSKSIQDSLHEEEQGFAAEHFQKSAATKVENTFLSEGFYSAEANREDAKLEDLRKSTISSASNSSMDKNISVNEESSSLIMHPLMVEHDSTASEDCTKKNENPDSFTEEGSHMNCLSSESCDNHNTDTLAAKNNDVAKQCIICSTQKEDDNVTPNGISLSVVTATDGGGDDDEAINNALDSPCQERADALESLLELCAQLLKQDKLEELAGVLRPFGKEAVSSRETAIWLTKSLISAQKFNPEN* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3563 645 Gene3D Transferase(Phosphotransferase) domain 1 98 342 - -
Mal3g3563 645 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 10 476 - -
Mal3g3563 645 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 480 628 - -
Mal3g3563 645 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 10 476 - -
Mal3g3563 645 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 480 628 - -
Mal3g3563 645 MobiDBLite consensus disorder prediction 491 514 - -
Mal3g3563 645 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Mal3g3563 645 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3563 645 MobiDBLite consensus disorder prediction 491 507 - -
Mal3g3563 645 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3563 645 CDD STKc_Nek 16 270 - -
Mal3g3563 645 SUPERFAMILY Protein kinase-like (PK-like) 13 327 IPR011009 -
Mal3g3563 645 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3563 645 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Mal3g3563 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3563 Mal-Chr3 112851645 112856290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3563 9 271 MAP Kinase Kinase Kinase AT3G13530 33.585 2.61e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mal3g3563 Pkinase 2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3563 K08857 - gmx:100793379 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3563 3 112851645 112856290 Mal3g3563 3 112851645 112856290 ECH
Mal3g3563 3 112851645 112856290 Mal1g3732 1 72175909 72183217 PCT