Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3548 ATGCTTCAACTGGAGTGTCTCCTTAGATTAGCACTGTTGCTGTGTGTTTCATTTGGCTTCTTGCTACATCCTGTTGTAACAGCTGTGATACCATTAGGTTCAAAACTTTCTGTTGTTGATAATAGTTGTTGGGTTTCTACCAATGGCGATTTTGCCTTCGGGTTCTTTAACATTTCTGATGAACCTAACCAGTTTAGTGTCGGCATTCGTTTCAATTCAAAGATTATTCCTTATAGCCAACAAACACTTGTATGGATTGCTGGTGCTCATGTCAAAGTAAGCAACATGTCTTATTTCCAGCTCACTCCACAAGGGGAACTTGTTTTGTTTGATTCCTTACATGGAGTCACTGTGTGGACCAGTCACACAGGAAATCGATCTGTTGTTTCGGCTGCTCTTCACGACAACGGAAATCTTGTTCTGATAGATGCAAAACAAAATATTATTTGGCAAAGTTTTGATACTCCTTCTGATACACTTCTCCCAGGACAGAGTTTATCTGTTTATGAAACGCTTCGTGCTTCAACCAAAGACCCTGAGAATAGTTACTATAGTCTTTACATGAATGTTTCTGGTCGGTTGCAGCTTCGTTGGGAGAGTAATATTGTATACTGGACAAGTGAAAGCCTCTCTTCTACTGCAAATCTCACTGCATTCCTTACAACTGACGGATCTTTGCAACTTCGAGACCAAAATTTGAAAGCTGTTTGGAGTGTATTTGGAGAAGACCACAATGATTCTGTAAGTTATCGGTTTCTTAGGCTAGATTTGGATGGTAATCTCCGGTTATACTCATGGATGGAAGCTTCACAATCATGGAGATCTGTTTGGCAAGCTATTGAGAATCAATGCAAAGTCTTTGCTACTTGTGGAAAACGTGGTGTCTGTGTCTTCACTGCTTCAGGTTCTGCCGAGTGCCGGTGCCCTTTTGAGGTAACTGAGACTAACATTTGTTTGGTTCCATATGAACAGGATTGTGCATCTGGCACCAACATGCAACAATACAAGAACATATATCTATATGGAATTTACCCTCCTGATGATTCAGTTGTCACAACTAGTCTGCAGCAATGCGAACAGTTGTGTCTCAATGACTCTCGGTGTACAGTCGCAACCTTTTCCAACAATGGTGGTCCACAATGCTCCATAAAGAAAACCAGGTACATAACTGGCTATGAAGATCCATCTCTAAGCTCAATATCATTTGTTAAGAGCTGCTCAGGTCCATTTGCTGTAAATCCTGGTATCATGAAGTCGCCTCCATCAAAACCGTCTCCTCGAAGGCTTTGTGTTCCTTGCTTGGTAGGGGCAGCCTCAGGAACATTTGTGATCTTTGCTTTTGTCCAGCTGGGAATTGTTTTCTTCATATGTAGAAGAAAAAGCTCTACCATGAGAAGAGTCACATTAGCATTCACATTCCCGGATTCAAAAGGTTTAATGGTGTTATCCTTCTCAGAAATCAAGAGCATCACCGGAGATCTCAAGAATCAAATAGGGCCAAATATGTTCAAGGGTGTGCTACCAAGCAATCGTCTAATTGCGATCAAAGACCTGAATGCAACCATAGAAGAAAGGAAGTTCCGGAGCGCTGTTCTGAAGATAGGGAACATCCGCCACAAGAACCTAGTGAAGCTGGAGGGTTATTGCTGTGAGTTCAATCACAGATATTTGGTGTATGAGTACGCCAAAAATCGTTCGCTGGAAAAGTATTTAGATGACTCTACTCTATGCAAGAGGCTAACTTGGAGAAAGAGAGTTGAAATATGCTCAAGTGTGGCGAAGGCCATATGTTATTTGCACTCAGGCTGTAGGGAGTTTATAAGCCATGGAAATTTGAAATGTGAGAATGTGATGTTGGATGAAGATTCAGTTGCTAAGGTGTCTGAATATGGATTTGCAATAGTTGATGGTGAGGCTACATATTGCGGCTTTTCAGCTGAAAAAGATGTAGGAGATTTTGGCAAACTAGTATTAACCTTGATGACCGGGCGTCGAGATCACGAACAAGTTTCTGAATGGGCATACAAAGAATGGATGGAAGGGAGGGTAGCTAATGTGGTTGATAAAAGAATCGACGGTGGTGCTAATTTGGAGGAACTTGAACGCTCATTAAGAATTGCGTTCTGGTGCGTTCAAGTCGATGAACGTAAAAGACCTCCGATGGAAGAGGTAGTGAGAGTACTAGATGGTACATTGAATGTTGATCCACCACCACCTCCATTTCTTTTGCCATTTGATCCACAAGAAAATGATTCAGAGCCAGATTCAGTGGTTTAG 2277 0.4172 MLQLECLLRLALLLCVSFGFLLHPVVTAVIPLGSKLSVVDNSCWVSTNGDFAFGFFNISDEPNQFSVGIRFNSKIIPYSQQTLVWIAGAHVKVSNMSYFQLTPQGELVLFDSLHGVTVWTSHTGNRSVVSAALHDNGNLVLIDAKQNIIWQSFDTPSDTLLPGQSLSVYETLRASTKDPENSYYSLYMNVSGRLQLRWESNIVYWTSESLSSTANLTAFLTTDGSLQLRDQNLKAVWSVFGEDHNDSVSYRFLRLDLDGNLRLYSWMEASQSWRSVWQAIENQCKVFATCGKRGVCVFTASGSAECRCPFEVTETNICLVPYEQDCASGTNMQQYKNIYLYGIYPPDDSVVTTSLQQCEQLCLNDSRCTVATFSNNGGPQCSIKKTRYITGYEDPSLSSISFVKSCSGPFAVNPGIMKSPPSKPSPRRLCVPCLVGAASGTFVIFAFVQLGIVFFICRRKSSTMRRVTLAFTFPDSKGLMVLSFSEIKSITGDLKNQIGPNMFKGVLPSNRLIAIKDLNATIEERKFRSAVLKIGNIRHKNLVKLEGYCCEFNHRYLVYEYAKNRSLEKYLDDSTLCKRLTWRKRVEICSSVAKAICYLHSGCREFISHGNLKCENVMLDEDSVAKVSEYGFAIVDGEATYCGFSAEKDVGDFGKLVLTLMTGRRDHEQVSEWAYKEWMEGRVANVVDKRIDGGANLEELERSLRIAFWCVQVDERKRPPMEEVVRVLDGTLNVDPPPPPFLLPFDPQENDSEPDSVV* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3548 758 SUPERFAMILY alpha-D-mannose-specific plant lectins 175 275 IPR036426 -
Mal3g3548 758 ProSiteProfiles Bulb-type lectin domain profile. 157 276 IPR001480 -
Mal3g3548 758 Gene3D Phosphorylase Kinase; domain 1 457 561 - -
Mal3g3548 758 Gene3D - 156 275 IPR036426 -
Mal3g3548 758 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 207 IPR036426 -
Mal3g3548 758 Gene3D Transferase(Phosphotransferase) domain 1 563 641 - -
Mal3g3548 758 ProSiteProfiles PAN/Apple domain profile. 326 406 IPR003609 -
Mal3g3548 758 Pfam D-mannose binding lectin 82 169 IPR001480 -
Mal3g3548 758 SMART blect_4 35 156 IPR001480 -
Mal3g3548 758 ProSiteProfiles Protein kinase domain profile. 473 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3548 758 Gene3D - 27 155 IPR036426 -
Mal3g3548 758 PANTHER OS07G0415500 PROTEIN 8 754 - -
Mal3g3548 758 Pfam S-locus glycoprotein domain 205 308 IPR000858 GO:0048544
Mal3g3548 758 CDD B_lectin 45 156 IPR001480 -
Mal3g3548 758 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 8 754 - -
Mal3g3548 758 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Mal3g3548 758 Gene3D Hepatocyte Growth Factor 323 408 - -
Mal3g3548 758 MobiDBLite consensus disorder prediction 737 758 - -
Mal3g3548 758 Pfam Protein tyrosine and serine/threonine kinase 511 634 IPR001245 GO:0004672|GO:0006468
Mal3g3548 758 PIRSF SRK 1 641 IPR024171 GO:0004674
Mal3g3548 758 PIRSF SRK 639 758 IPR024171 GO:0004674
Mal3g3548 758 Gene3D Transferase(Phosphotransferase) domain 1 642 734 - -
Mal3g3548 758 SUPERFAMILY Protein kinase-like (PK-like) 503 728 IPR011009 -
Mal3g3548 758 SMART ntp_6 327 405 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3548 Mal-Chr3 112652322 112654598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3548 414 735 Receptor kinase-like Gene Family AT1G56120 32.033 4.55e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal3g3548 PK_Tyr_Ser-Thr 2.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3548 - - gmx:100809478 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3548 3 112652322 112654598 Mal3g3548 3 112652322 112654598 ECH