Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3544 ATGGGTAATTGCTGCGCTACACCCCCTGCTGTAAACGGAGAAGAACCAACAACAAACAAGAAAACCAAAAAGGGCAAAAAAGAGAATCCATTCGCAACCGATTACGCATACAACAACACCGCATCAAAACTAACCGTTTTAAAAGATCCAACAGGTCACGAAATCGAAACTCGTTACGAGCTAGGTCGAGAACTCGGTCGAGGTGAATTCGGTGTAACGTATCTTTGCACAGACAAGGAAACGCGAGAAGAACTAGCGTGTAAGTCGATATCGAAGAAGAAGCTAAGAACAGCGATTGATATTGAAGATGTGAGAAGAGAAGTTGAAATAATGAGACATATGCCACAGCATAATAATATTGTTACGTTGAAAGATACTTATGAAGATGATAATGCTGTTCATCTTGTTATGGAGCTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTGCTAGAGGACATTATACTGAACGTGCTGCTGCTGCTGTTACCAAAACTATTGTTGAAGTTGTTCAGATGTGCCACAAACATGGTGTGATGCATAGGGATCTCAAGCCTGAGAACTTTTTGTTTGCAAATAAGAAGGAAACAGCAGCGTTGAAAGCTATAGATTTTGGATTGTCAGTGTTCTTTAAACCAGGTGAAAGATTTAATGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAGGTATTGAAGCGAAATTACGGCCCAGAAGTAGATATCTGGAGTGCTGGAGTTATTCTATACATCTTACTTTGTGGTGTCCCTCCATTTTGGGCAGAAACTGAGCAAGGAGTTGCACAAGCAATCATACGATCTGTTGTTGATTTCAAAAGGGATCCATGGCCAAAAGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTAAATCCTGACCCAAAGAAGCGACTTACTGCACAAGAAGTGTTAGATCATCCATGGTTAATAAATGCAAAGAAAGCTCCCAATGTTTCATTAGGAGAAACAGTTAGAGCAAGGCTAAAACAGTTTTCCGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTTATTGCAGAGCATTTGTCGGTAGAAGAAGCTGCTGGACTAAAAGAAGGATTCAAGCTTATGGATACAACCAACAAAGGCAAGATCAACATTGATGAGCTACGAATAGGGTTGCATAAACTAGGCCATCAAATTCCCGATGCTGATGTCCAAATTCTTATGGAAGCTGGTGATGTAGACAGGGACGGTTACCTAGATTATGGGGAGTATGTAGCCATTTCTGTTCATCTGAGAAAGATGGGAAATGATGAGCACCTTCACAAGGCCTTTGATTTTTTCGATCAGAACCAAAGTGGGTATATAGAGATTGAGGAGCTACGCAATGCCTTATCCGATGAAATTGAAACTAACAGTGAAGAAGTCATTAATGCAATTATGCATGATGTGGACACAGATAAGGATGGAAAGATAAGTTACGAGGAATTTACGAATATGATGAAGGCCGGCACAGATTGGAGAAAGGCATCAAGGCAGTATTCGCGAGAGAGGTTTAACAGTCTGAGCTTGAAATTGATGAAGGATGGGTCATTGCAATTAAACAATGAAAATCAATGA 1608 0.4036 MGNCCATPPAVNGEEPTTNKKTKKGKKENPFATDYAYNNTASKLTVLKDPTGHEIETRYELGRELGRGEFGVTYLCTDKETREELACKSISKKKLRTAIDIEDVRREVEIMRHMPQHNNIVTLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKKMLNPDPKKRLTAQEVLDHPWLINAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLSVEEAAGLKEGFKLMDTTNKGKINIDELRIGLHKLGHQIPDADVQILMEAGDVDRDGYLDYGEYVAISVHLRKMGNDEHLHKAFDFFDQNQSGYIEIEELRNALSDEIETNSEEVINAIMHDVDTDKDGKISYEEFTNMMKAGTDWRKASRQYSRERFNSLSLKLMKDGSLQLNNENQ* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3544 535 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3544 535 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Mal3g3544 535 Pfam EF-hand domain pair 377 425 IPR002048 GO:0005509
Mal3g3544 535 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Mal3g3544 535 Gene3D Phosphorylase Kinase; domain 1 61 144 - -
Mal3g3544 535 Pfam Protein kinase domain 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3544 535 Pfam EF-hand domain pair 435 498 IPR002048 GO:0005509
Mal3g3544 535 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Mal3g3544 535 SUPERFAMILY EF-hand 346 524 IPR011992 -
Mal3g3544 535 Gene3D Transferase(Phosphotransferase) domain 1 145 325 - -
Mal3g3544 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Mal3g3544 535 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3544 535 CDD STKc_CAMK 58 316 - -
Mal3g3544 535 SUPERFAMILY Protein kinase-like (PK-like) 57 324 IPR011009 -
Mal3g3544 535 SMART efh_1 436 464 IPR002048 GO:0005509
Mal3g3544 535 SMART efh_1 364 392 IPR002048 GO:0005509
Mal3g3544 535 SMART efh_1 472 500 IPR002048 GO:0005509
Mal3g3544 535 SMART efh_1 400 428 IPR002048 GO:0005509
Mal3g3544 535 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Mal3g3544 535 Gene3D - 326 500 - -
Mal3g3544 535 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 514 - -
Mal3g3544 535 MobiDBLite consensus disorder prediction 1 31 - -
Mal3g3544 535 CDD EFh 436 498 IPR002048 GO:0005509
Mal3g3544 535 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 21 514 - -
Mal3g3544 535 ProSiteProfiles EF-hand calcium-binding domain profile. 468 503 IPR002048 GO:0005509
Mal3g3544 535 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Mal3g3544 535 ProSitePatterns EF-hand calcium-binding domain. 481 493 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3544 Mal-Chr3 112584057 112588129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3544 1 534 EF-hand Containing Proteins AT5G19450 79.740 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal3g3544 Pkinase 1.8e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3544 K13412 - gmx:100790745 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3544 3 112584057 112588129 Mal3g3544 3 112584057 112588129 ECH
Mal3g3544 3 112584057 112588129 Mal1g3787 1 74985549 74989950 PCT