Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3509 ATGGCTTCATCTTCCTCCGATCCCGGTGGCGGCAAGTCTGTTGAAACCTCAGAAGCTGTGGCGGCGGCGAATGATCAGCTTTTACTGTACAGAGGATTGAAGAAAGCAAAGAAAGAAAGAGGTTGTACTGCTAAAGAACGAATCAGTAAAATGCCTCCTTGTGCTGCTGGTAAACGCAGCTCCATCTACCGTGGTGTCACCAGGCATAGATGGACTGGTCGTTATGAAGCGCATCTTTGGGATAAAAGTACATGGAACCAAAATCAAAATAAGAAAGGAAAACAAGTTTACTTGGGGGCATATGATGATGAGGAAGCAGCAGCTAGAGCGTATGACCTTGCTGCTCTGAAATATTGGGGTCCTGGGACTCTCATTAACTTCCCAGTGACTGATTATACAAGAGATCTCGAAGAAATGCAGAACGTTTCAAGAGAAGAATATCTTGCATCTTTGCGACGGAAGAGCAGTGGTTTTTCAAGAGGTCTATCAAAATATCGTGGACTCTCCAGTCGATGGGGGCCATCATATGGTCGAATGGCTGGATCTGATTACTTCAGTAGTATACATTATGGGGATAATTCAGCTGCGGAAAGTGAATATGTTAGTGGTTTCTGCGTAGAAAGAAAGATTGATTTAACAAATCACATCAAATGGTGGGGATCTAATAAGAATCGACAACCTGATGCTGGAACAAGATTATCAGAAGAAAAGAAACATGGTTTTGCTGGGGATATTTACAGTGAACTTAAAACATTGGAACAGAAAGTCCAACCAACAGAACCGTACAAGATGCCAGAGTTAGGACCGCTGCACAATGAGAAAAAACATAAAAGTTCTTCAATCTCTGCCCTAAGTATATTGTCTCAGTCTGCTGCTTACAAGAGCATGCAAGAGAAAGCGGCAAAAAGACAGGAAAATAGCACTGATAATGATGAGAATGAAAACAAAAATATAGTCAATGAGTTGGATCGTGGGAAGGCAGTCGAGAAACCCTCAAATCATGATGGTAGCAATGATCAACTTGACATTGCAATGGGAATGAGTGGGGCGTTGTCTCTTCAAAGAAATGTTTACCCGTTGACATCATTTTTGTCTGCACCACTTTTGACAGCCTACAACACTGTTGATCCAATGGTAGATCCTGTTCTCTGGACATCTCTCATTCCCATGCTTCCTGCTGGCCTTTCTCGTACATCTGAGGTTACAAAGACGGAGCCGGATTCAACCTACACTATGTTTCAGCCACAGGAGTGA 1254 0.429 MASSSSDPGGGKSVETSEAVAAANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWGPSYGRMAGSDYFSSIHYGDNSAAESEYVSGFCVERKIDLTNHIKWWGSNKNRQPDAGTRLSEEKKHGFAGDIYSELKTLEQKVQPTEPYKMPELGPLHNEKKHKSSSISALSILSQSAAYKSMQEKAAKRQENSTDNDENENKNIVNELDRGKAVEKPSNHDGSNDQLDIAMGMSGALSLQRNVYPLTSFLSAPLLTAYNTVDPMVDPVLWTSLIPMLPAGLSRTSEVTKTEPDSTYTMFQPQE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3509 417 MobiDBLite consensus disorder prediction 322 341 - -
Mal3g3509 417 ProSiteProfiles AP2/ERF domain profile. 62 128 IPR001471 GO:0003700|GO:0006355
Mal3g3509 417 MobiDBLite consensus disorder prediction 322 336 - -
Mal3g3509 417 Pfam AP2 domain 62 120 IPR001471 GO:0003700|GO:0006355
Mal3g3509 417 MobiDBLite consensus disorder prediction 256 281 - -
Mal3g3509 417 SMART rav1_2 62 134 IPR001471 GO:0003700|GO:0006355
Mal3g3509 417 MobiDBLite consensus disorder prediction 298 316 - -
Mal3g3509 417 MobiDBLite consensus disorder prediction 295 316 - -
Mal3g3509 417 Gene3D AP2/ERF domain 62 130 IPR036955 GO:0003700|GO:0006355
Mal3g3509 417 SUPERFAMILY DNA-binding domain 61 129 IPR016177 GO:0003677
Mal3g3509 417 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 412 - -
Mal3g3509 417 PANTHER BNAA03G19580D PROTEIN 9 412 - -
Mal3g3509 417 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Mal3g3509 417 PRINTS Ethylene responsive element binding protein signature 110 130 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3509 Mal-Chr3 112240603 112244641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3509 20 409 AP2-EREBP Transcription Factor Family AT2G41710 65.174 6.46e-173 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal3g3509 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3509 K09285 - gmx:100814117 716.842