Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3508 ATGGGAACCGCTTCGCGGCAGTTAAAGGTTATGCTCAGAAAAAACTACCTCCTCAAAATTCGTCACCCTTTCGTTACTGCTGCTGAGATTTTGCTCCCTGCGATTGTGTTGTTGCTATTAGCAGCTGTAAGAACACAAGTGGATACACAAATTCATCCAGATCAATCGCACATTCAGAAAGATATGTTTGTAGAAGTGGGGAAAGGTATATCCCCTAACTTTCAACAAGTTTTGGAATCCTTGTTGGATAAGAGAGAGTATTTAGCGTTTGTACCAGACACCAATGAAACAAGGATGATGATAGACGTGGTGTCCATCAAATTTCCGATTTTGAAGCATGTTAGTATTGTATACAACGATGAGTTAGAGTTGGAAACCTACATCCGGTCAGATGCTTATGGTACCTGCAATGACATAAGGAATTGTTCGAATCCCAAAATTAAAGGAGCGATTGTATTTCACGAACAAGGTCCTCAGTCATTTGATTATAGCATCCGTCTCAATCATACATGGGCTTTCTCGGGTTTTCCGGATGTTACAACAATTATGGATACAAATGGCCCTTTTCTTAATGACTTAGAACTTGGTGGTAGTGCTATACCAACAATGCAATACAGCTTCAGTGGGTTTTTGACACTCCAGCAAATGGTTGATTCGTTCATAATAATAACTGCTCAACAACCTGAATTAAATTTGAGTGCCGAAACTGTAAAACTTCCTCTTCTTGGATTTCATGACAGTGATTTCTCACGAAAAGTTCCATGGTCTCAGTTTAACCCTAATAACATACGAATAGCTCCATTTCCCACTCGAGAGTACACGGATGACCAGTTCCAGGCAATAGTAAAGGAAGTCATGGGAATACTGTATTTATTGGGGTTTCTCTATCCAGTTTCTCGCCTGATAAGTTATTCTGTGTTTGAGAAGGAACAAAAGATTAAAGAAGGACTCTATATGATGGGCTTAAATGACGGCATATTTCATCTCTCTTGGTTTATCACATATGCTGTGCAGTTTGCAATTTCTTCTGCGGTCATTACAGCTTGCACTATGGATAATATATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTCTTCATTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTTATATCAACGTTTTTCAAAAGGGCTAAAACAGCTGTAGCTGTTGGAACTCTGTCATTTCTTGGTACCTTTTTGCCTTATTACTCTGTCAACGATGAGGGAGTCTCTATGATCTTGAAGGTTCTCGCTTCTCTGCTTTCACCTACGGCATTTGCTTTGGGTTCTGTCAACTTTGCTGATTACGAGCGTGCTCATGTTGGGCTCCGCTGGAGCAACATATGGCGGGAGTCCTCTGGAGTGAACTTTTCTGCATGTCTTCTGATGATGATACTTGATTCACTGCTCTATTGTGCAATTGGATTGTATTTCGATAAGGTTCTTCCAAGGGAGTATGGACTGCGATATCCATGGAACTTTATTTTCAAAAAGGACTTCTGGAGAAAGAGAAAAAATGCAAATAATTGTTCCTCCAGTTTTAAAGTTAAATTTGCTGGTAAGAGTTCTGAGTCAGAAGGGAATCTTTTGGGGCAAGGTATTTTCAATCCTGCTCTAGAAGCAATAAGCTTAGACATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTGCATAAAGTGTATGCTACTAAAAAAGGAGATTGCTGTGCTGTTAACTCATTAAAGCTTGCGTTATATGAAAATCAGATTCTTGCTCTTTTAGGACATAATGGAGCTGGGAAAAGTACGACAATATCAATGCTTGTTGGTCTTCTTCCTCCTACTTCTGGGGATGCTTTGATTTTTGGAAAGAACATTGTCTCTGATATTGATGAGATACGGAAGGTCTTGGGTGTCTGCCCACAACATGATATACTATTTCCTGAATTAACTGTGAGAGAGCATTTAGAACTATTTGCCATATTAAAGGGTGTTGAGGAAGACACATTGGAGAGCGTTGTTATTAATATGGCCGATGAGGTGGGCCTTGCTGATAAAATCAACACTGTTGTGAGATCTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGCAATCGCATTGATTGGAAACAGTAAGGTTATAATTCTTGATGAGCCTACAAGTGGAATGGATCCATACTCAATGCGTTTGACTTGGCAGTTAATAAAAAAAATTAAGAAGGGCAGGATAATTTTGCTAACAACACATTCTATGGATGAAGCAGATGAACTAGGTGACCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCTCTTTTCTTGAAGCATCATTATGGAGTCGGTTACACTCTAACTCTTGTAAAGTCCGCTCCTACTGCTTCTATAGCTGGTGATATTGTATACCGATATGTTCCGACAGCAACCTGTATAAGCGAGGTTGGAACTGAGATTTCCTTCAGACTCCCTATGGCATCCTCCTCAACCTTTGAGAGGATGTTCAGGGAAATTGAAGGTTGCATGAAAAAGCCAGTTTCAAGCATGGAAATAAGCGGCAACTGTGAAAAAGACAGTCACGGTATTGAAAGCTATGGTATATCTGTAACAACCCTGGAGGAGGTATTCTTGAGAGTTGCTGGATGTGAATATGATGAAGTTGAATGCTTTGAAGAAAATAACCGTTCGCTTATATCAGAATCTGTGGTTTCTCTTCCTTCTAATGATCGTCCATCCACAAAAATATGTTATTATAAATTTTGGGGAAATTATAAGAAGATTCTTGGTTTCATGTCTACCATGGTGGGGAGAGCTTGTGATTTAATTTTTGCTACAGTTATTAGCTTTGTCAACTTCATAAGCCTGCAGTGTTGTAGCTGTTGTCTCATTACTACGTCCACTTTTTGGCAACATTCTAAAGCCTTAATTATTAAGAGGGCGATATCTGCTCGGAGAGATCACAAAACAATTATTTTTCAGCTAATGATTCCCGCTATCTTCTTGTTTATTGGTCTTCTATTTCTGGAGCTCAAGCCACATCCTGATCAGATTTCACTGACTCTTTCAACTTCTTATTTTAATCCTCTATTGAGTGGTGGGGGTGGGGGTGGTCCAATTCCGTTTAACCTATCTTTTCCAATTGCTGAAAAGGTAGCAAAAAATGTTAAAGGAGGTTGGATTCAAAGGTGCAACTCAAGCTCATACAAATTCCCCAATTCGGAAAAGGCATTAGCTGATGCAGTGGAAGCAGCAGGGCCAGCTTTGGGACCTACTCTACTTTCCATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAGAACGCCGATGGAAGTTTAGGCTACACTGTATTACATAACTTTTCTTGTCAACATGCTGCTCCCACCTTTATCAATTTGATGAATTCTGCAATTCTTAGGCTTGCTACTCATAATGTGAATGCAACAATTCAGACACGCAACCACCCTCTACCAATGACACAAAGCCAGCACTTACAACGCCATGACCTGGATGCCTTCTCTGCTGCTATCATTGTCAATATAGCCTTCTCTTTCATTCCTGCCTCATTTGCTGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCACCAACAACTAATCAGTGGGGTTTCGGTCCTTTCATATTGGGTCTCTACATTTATTTGGGACTTCGTGAGCTTCTTGTTTCCTGCCTCTTTTGCCATAGTTCTCTTTTACATCTTTGGTCTAGATCAGTTTGTTGGAGGAGTTTCTTTGTTACCAACGATCATCATGCTTTTGGAATATGGACTTGCAATTGCATCATCAACTTATTGCCTTACATTTTTCTTTTTTGACCATACTGTGGCACAGAACGTGGTTCTCCTGGTCCACTTTTTTTCTGGATTGGTACTAATGGTTATCTCATTCATTATGGGGCTCCTCCCATCCACAATAAGCACCAACTCTTTTCTTAAGAACTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGACGGTCTTGCTTCATTGGCTCTTTTGCGGCAAGGAATGAAAGATAAAAGCAGTGATGGAGTGTATGACTGGAATGTTACGGGTGCCTCCATTTGTTATCTTGCTGCTGAGAGCTTTATTTATTTTTTATTGACACTCGGGCTTGAAATATTTCCTTCTCTCAAATTAACTCCATTCAAGATCAAGAAGTGGTGGGGGGAAATTAATATCTTCCCACGTAATACTACTTATCTGGAACCTTTATTAGAATCTTCACCAGAAACTTTTGTTACGGACGTCAATGAAGATGTGGATGTGAAAACAGAAAGGAATAGAGTACTTTCAGGTTCCATTGACAATGCCATTATCTACTTGCGCAATCTTCGCAAGGTGTATTCTGAAGAGAATAATCATGGGAAAAAGGTTGCAGTAGATTCATTAACCTTCTCGGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACGCTTTCTATGTTATGCGGGGAAGAATCTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGACATATGTTCCCATCCCAAGGCTGCTAGCAAATATATTGGATATTGTCCACAATTTGATGCTCTGTTGGAATTCTTAACTGTCAAAGAGCATCTTGAGCTCTATGCTAGAATAAAAAGTGTTCCAGACTACACAATAGACAATGTTGTTATGGAAAAGCTGGTGGAGTTTGACTTATTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGAAAACTATCTGTTGCAATTGCAATGATCGGAGATCCTCCTATTGTCATTCTTGATGAGCCATCCACAGGAATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGAATCTCAACTAGACGAGGCAAGACTGCAGTTATTCTTACTACCCATAGCATGAATGAAGCTCAAGCCTTGTGTACCAGAATAGGGATTATGGTTGGTGGACAACTCAGATGCATTGGAAGTCCGCAGCATCTAAAAACAAGATTTGGCAATCATTTAGAACTAGAGGTAAAACCTACTGAAGTGAGCTCTGTGGACTTGCAAACACTCTGCCAAACTATTCAGGAAATACTTTTTGATGTCCCTTCTCAACCTAGAAGCTTACTTAATGACCTTGAAGTTTGCATTGGGGGTGCTGATTCCGTCACCTCAGGAAATACCTCCATTGCAGAGATTAGCTTGACATCAGAGATGATAGGCTTAATTGGACGCTGGCTTGGCAACGAAGAAAGAGTAAAGACTCTATTGTACTGTACACCTGTCTACGATGGGGCCTCTCAGGAACAGTTATGCGAACAATTATTTCGAGATGGTGGTATTCCGTTGCCCGTGTTTTCTGAGTGGTGGTTATCCAAACAAAAGTTCTCAGAAATTGACTCATTTATTCTCTCTTCATTTCGTGGAGCAAGATGCCAGGGATACAATGGTTTAAGCATCAGATACCAGTTACCTTATGATGACGACTTTTCCCTGGCAGATGTTTTTGGACTTCTAGAAGCAAGCAGATATAAGTTAGGGATTGCAGAGTACAGCCTCAGCCAATCAACCCTAGAGACAATATTTAATCATTTTGCAGCTAATTCATGA 5679 0.4001 MGTASRQLKVMLRKNYLLKIRHPFVTAAEILLPAIVLLLLAAVRTQVDTQIHPDQSHIQKDMFVEVGKGISPNFQQVLESLLDKREYLAFVPDTNETRMMIDVVSIKFPILKHVSIVYNDELELETYIRSDAYGTCNDIRNCSNPKIKGAIVFHEQGPQSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGGSAIPTMQYSFSGFLTLQQMVDSFIIITAQQPELNLSAETVKLPLLGFHDSDFSRKVPWSQFNPNNIRIAPFPTREYTDDQFQAIVKEVMGILYLLGFLYPVSRLISYSVFEKEQKIKEGLYMMGLNDGIFHLSWFITYAVQFAISSAVITACTMDNIFKYSDKTLVFAYFFIFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGTFLPYYSVNDEGVSMILKVLASLLSPTAFALGSVNFADYERAHVGLRWSNIWRESSGVNFSACLLMMILDSLLYCAIGLYFDKVLPREYGLRYPWNFIFKKDFWRKRKNANNCSSSFKVKFAGKSSESEGNLLGQGIFNPALEAISLDMKQQELDGRCIQIRNLHKVYATKKGDCCAVNSLKLALYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALIFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFAILKGVEEDTLESVVINMADEVGLADKINTVVRSLSGGMKRKLSLAIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRYVPTATCISEVGTEISFRLPMASSSTFERMFREIEGCMKKPVSSMEISGNCEKDSHGIESYGISVTTLEEVFLRVAGCEYDEVECFEENNRSLISESVVSLPSNDRPSTKICYYKFWGNYKKILGFMSTMVGRACDLIFATVISFVNFISLQCCSCCLITTSTFWQHSKALIIKRAISARRDHKTIIFQLMIPAIFLFIGLLFLELKPHPDQISLTLSTSYFNPLLSGGGGGGPIPFNLSFPIAEKVAKNVKGGWIQRCNSSSYKFPNSEKALADAVEAAGPALGPTLLSMSEYLMSSFNESYQSRYGAIVMDDQNADGSLGYTVLHNFSCQHAAPTFINLMNSAILRLATHNVNATIQTRNHPLPMTQSQHLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSVLSYWVSTFIWDFVSFLFPASFAIVLFYIFGLDQFVGGVSLLPTIIMLLEYGLAIASSTYCLTFFFFDHTVAQNVVLLVHFFSGLVLMVISFIMGLLPSTISTNSFLKNFFRISPGFCFADGLASLALLRQGMKDKSSDGVYDWNVTGASICYLAAESFIYFLLTLGLEIFPSLKLTPFKIKKWWGEINIFPRNTTYLEPLLESSPETFVTDVNEDVDVKTERNRVLSGSIDNAIIYLRNLRKVYSEENNHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAASKYIGYCPQFDALLEFLTVKEHLELYARIKSVPDYTIDNVVMEKLVEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDLQTLCQTIQEILFDVPSQPRSLLNDLEVCIGGADSVTSGNTSIAEISLTSEMIGLIGRWLGNEERVKTLLYCTPVYDGASQEQLCEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGYNGLSIRYQLPYDDDFSLADVFGLLEASRYKLGIAEYSLSQSTLETIFNHFAANS* 1893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3508 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1464 1702 IPR003439 GO:0005524
Mal3g3508 1892 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 6 1318 - -
Mal3g3508 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1315 1888 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mal3g3508 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 1318 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mal3g3508 1892 CDD ABC_subfamily_A 1464 1690 - -
Mal3g3508 1892 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1315 1888 - -
Mal3g3508 1892 Pfam ABC-2 family transporter protein 992 1394 - -
Mal3g3508 1892 Pfam ABC-2 family transporter protein 249 480 - -
Mal3g3508 1892 SMART AAA_5 1494 1680 IPR003593 -
Mal3g3508 1892 SMART AAA_5 588 770 IPR003593 -
Mal3g3508 1892 CDD ABC_subfamily_A 560 781 - -
Mal3g3508 1892 Gene3D - 547 796 IPR027417 -
Mal3g3508 1892 Gene3D - 1455 1706 IPR027417 -
Mal3g3508 1892 Pfam ABC transporter 1486 1628 IPR003439 GO:0005524
Mal3g3508 1892 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Mal3g3508 1892 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524
Mal3g3508 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1463 1693 IPR027417 -
Mal3g3508 1892 ProSitePatterns ABC transporters family signature. 1601 1615 IPR017871 GO:0005524
Mal3g3508 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 798 IPR027417 -
Mal3g3508 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3508 Mal-Chr3 112205181 112234625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3508 560 796 Calmodulin-binding Proteins AT2G36910 25.506 5.05e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3508 K05643 - gmx:100803263 3305.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3508 3 112205181 112234625 Mal3g3508 3 112205181 112234625 ECH