Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3485 ATGCGGTGGATTTCAGATAAAATGATGCAAGATGCTGAAGCACCTCCAGTAGAGACCAGCACTGAATTGAACTTTGATGGGGCTGTGGCCAATGATTCTGAATCTGATGACAATAACCGGTATTTAGCAGACTGCAGAATATCACTTGTTGGTTTTGAAGCTTCTGAAATGGGGAAGCTTATTAATATGGTGCGTAAAGGTGGAGGCTCCCATTACTTGTCTTTAAATGATAAGTTGACACACATAGTAATTGGGAATCCGACAAAAATGGAAAGGAAGGATGTAGCGAGAACTGTTGCTCTAGGTGTCGATTACGTTGTTAAAGCCTCATGGCTTGACGATTGTGATCGTGAAAAAAAACAAGTCCCTGTTCTACAACGTTACAGTGCATCTGATATTCTTTTTCCAAAAGGTAAAGCATTGGGTAGAACTGTGTCACAAACTCCTCTTCCTGATGAAAAATTGAGGGTACAAAAGATTACACGTGACTCCAATGTACATGTGAAGTCAACTAATGTTTTCAAAGGGAAAACATTTTGTTTCTCGAATTTATTTCCTGAAGAAAGGAGAGCTGAGATTGAAAAATGGATAGTTCAAGGGGGAGGAGAGATTTTAAGTGGGCACACAAGACAGAGTATCCACTATACTATTGAATGCCATGGTGTAACATCCAGCTCGTCAGGTGCTTATGAAAATACCTATGTTTCCAGTCACTGGATACGATCTTGTTTGGAGGATGGATGCTTACTAGACGTTAACAGTCATATTCTTTATTCGCCACTTAGCTGCCGTGTTCCCTTGCCTGGTTTTGAAAGTCTCCGGTTTTTTGTTTCACAACATGAGAAGAAAGACAGAATCCTACTTTTGACCTTGTGTGAAGTTCTAGGAGCTAAAACTTTGGATAAGCTGACTGAGGAGGTCACCCATTTGTTGTGTGAATTTACCAATGATCCCGAGTACGAGGCTTCTAGTAAGTTGGGGGTCCAATCAGTTACATCTGAGTGGATATTTGAATGCGTCAGACAGGATGAAGTTATTTCCATTGATGAATTTTTGCTCAAAGAAGTCACTACTCAAGACCGAGAGGCGGGAGTTTGCAAAGTGAGTCAATTTCCTACACATGCTGTTGAAATGGCAAATAAAAATGTAGATAGTGGAGTTGAAAATGATGAGACTCCTTCTGAAGACAATATGCTCAAAGATGCTCGGGAGGCAACCCAGGGAACTGAATTGGTTGATGAAGTTGAGAAGTTGACATACCTGTTGGAGCAGAAGGCCCAAAGGATTCCAGAGCATGAGAGAAGTATTACCTGGTGTGATAATGGAGGTTGTGTTCTGTTTTAG 1344 0.41 MRWISDKMMQDAEAPPVETSTELNFDGAVANDSESDDNNRYLADCRISLVGFEASEMGKLINMVRKGGGSHYLSLNDKLTHIVIGNPTKMERKDVARTVALGVDYVVKASWLDDCDREKKQVPVLQRYSASDILFPKGKALGRTVSQTPLPDEKLRVQKITRDSNVHVKSTNVFKGKTFCFSNLFPEERRAEIEKWIVQGGGEILSGHTRQSIHYTIECHGVTSSSSGAYENTYVSSHWIRSCLEDGCLLDVNSHILYSPLSCRVPLPGFESLRFFVSQHEKKDRILLLTLCEVLGAKTLDKLTEEVTHLLCEFTNDPEYEASSKLGVQSVTSEWIFECVRQDEVISIDEFLLKEVTTQDREAGVCKVSQFPTHAVEMANKNVDSGVENDETPSEDNMLKDAREATQGTELVDEVEKLTYLLEQKAQRIPEHERSITWCDNGGCVLF* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3485 447 Gene3D BRCT domain 268 353 IPR036420 -
Mal3g3485 447 MobiDBLite consensus disorder prediction 1 20 - -
Mal3g3485 447 ProSiteProfiles BRCT domain profile. 37 129 IPR001357 -
Mal3g3485 447 SMART BRCT_7 39 119 IPR001357 -
Mal3g3485 447 SMART BRCT_7 171 247 IPR001357 -
Mal3g3485 447 SMART BRCT_7 267 343 IPR001357 -
Mal3g3485 447 ProSiteProfiles BRCT domain profile. 270 353 IPR001357 -
Mal3g3485 447 Pfam BRCT domain, a BRCA1 C-terminus domain 171 254 IPR001357 -
Mal3g3485 447 Gene3D BRCT domain 166 262 IPR036420 -
Mal3g3485 447 CDD BRCT 273 339 - -
Mal3g3485 447 ProSiteProfiles BRCT domain profile. 169 257 IPR001357 -
Mal3g3485 447 SUPERFAMILY BRCT domain 33 124 IPR036420 -
Mal3g3485 447 Pfam twin BRCT domain 274 335 IPR001357 -
Mal3g3485 447 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 27 397 - -
Mal3g3485 447 SUPERFAMILY BRCT domain 235 354 IPR036420 -
Mal3g3485 447 SUPERFAMILY BRCT domain 172 259 IPR036420 -
Mal3g3485 447 Gene3D BRCT domain 26 130 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3485 Mal-Chr3 111868175 111873500 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3485 169 382 Core DNA Replication Machinery Family AT1G77320 51.869 1.82e-67 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3485 K10728 - zju:107421117 444.121