Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3483 ATGGATCACTCCACTCTCTTCAATCTCCAGTCTTTGGTGAACTTTGAACTTCCAGAATACGACGATGATTTTGAATATTATGGGAATAGTAGTCAGGATGAGAGCAGAATCACCAGAGGTGGGGCGATTGGAAGTCATAGTAATGGGAATGTGTCGGGAAGGGATGTGAATTTGTTGAAGAGAAGTCGGTCTCGGAACAGTGACAACGAGGAAAAGAGTGGTTTTTACGGGACACCTATGATGGAGGAGCGATACCGGTCAATGCTTGGAGACCATATTAAGCAGTATAAGAGAAGGTTTAAGGGTAACTCGAGTAGTCCTGGACAAAATCAGGTTACTGTTCCATTTGCGAAAAATAATAATGGATTAAAAGCTCACAAGATAGGGAATGAGCGCAACAGAGGATTGCATGATGAAGAAACTTTATCTGAATGGATGAATGGTTCCAATGCCCAGAAATCAGGGAACTTCCTTGATACCGATTCCATACCGCAAAATCGCACTAATAGGGTTAGGTATGAACCTGCATATGTGGATGTTGGGAATGGTATAGCTTATAAGATTCCTCCAATTTATGATAAGTTGGCACCAATCGTGAACCTTCCAAGCCTCTCAGATATCCACGTTGAGGATTTTTTCCTAAAGGGCACATTGGATTTGGGTTCCTTGGCTGAAATGATGGCATCTGATAAAAAATTTGGGAATAGAAATCGAGCAGGCATGGGGGAAACTGTATCCCAATATGAATCACTTCAAGCACGTCTAAAGGACACATCCGCTTCTCATTCAACTCACAAATTCAGTCTGAAATTATCCGAGGCTGATTTGAATTCCTCCATTCCAGAGGGGGCAGCTGGAAGGATAAAGCGGTCTATTTTATCTGAGGGTGGCATATTACAGGTTTATTATGTGAAGGTTTTGGAGAAAGGCGACACTTATGAGATCATTGAAAGAAGCTTACCCAAGAAACAAAAGGTAACAAAAGACCCTGCTTTAATAGAGAAAGAGGAAATGGAAAAATTCGGAAAGATTTGGGTAAATATTGCAAGAAGAGACCTACCAAGATATCATCGGAATTTTACTACTTTTCATCGAAAGCAGGTCGTTGATGCCAAGAGGGCCGCAGATATTTGTCAAAGAGAGGTTAAAATGAAAGTTAGTAGATCACTTAAATGGACAAGAACTGCTAGCATGCGCACCCGAAAACTGGCTAGAGACATGCTACTATTCTGGAAACGAATAGATAAGGAGATGTTAGAAGTGAGGAAAAGGGAGGAAAAAGAAGCTGCTGAAGCTTTGAGGCGTGAGCAAGAGCTTCGAGAAGCAAAGAGGCAGCAGCAAAGACTAAATTTTCTTATACAGCAGACTGAGCTGTACAGTCACTTTATGCAAAACAAGCCCATATCTTCAGAAGCTCTATCCATGGCAGATGAAAATACAAATGATGAAAATGCACTGATCAACTCTTCAGCTGCTGATCCTAACGAGGAGGAAGATCCCGAAGAGGCTGAATTGAAGAAGGAGGCTTTGAAGGCTGCTCAAGAAGCAGTTTCTAAGCAGAAAATGTTAACAAGTGCTTTTGACACCGAATGCTTGAGGCTGCGCCAGGCTGGTGAATCTGATTCACTTCAACCAGAAGTTTCTGGAGCAAGTCATATTGACTTGAAGACCCCCTCCACCATGCCTGTGGCATCAACAGTTCGGACACCTGAATTATTCAATGGTTGTCTCAAAGATTATCAGCTAAAAGGTCTTCAGTGGCTAGTTAATTGTTATGAGCAGGGTTTAAATGGTATTCTTGCTGATGAGATGGGACTTGGAAAGACCATTCAGGCTATGGTGTTTTTAGCCCATTTAGCTGAGGAGAAAAACATATGGGGACCTTTTTTGATTGTTGCACCTGCTTCTGTATTAAATAATTGGAATGAGGAGCTCGAGCGCTTCTGCCCTGAACTGAAAGTACTTCCTTATTGGGGTGGGCTTTCAGAGCGGACAGTGCTTAGGAAAAGTATGAACCCAAAGGATCTTTATCGCAGGGAAGCTAAATTTCACATTCTCATCACAAGCTACCAGCTGTTAGTCTCTGATGAGAAGTATTTCCGGCGGGTGAAATGGCAGTATATGGTTTTAGACGAAGCTCAGGCAATTAAAAGTTCCAATAGTATAAGATGGAAGACACTCCTCAGCTTTAACTGTCGGAATCGCTTACTGCTGACTGGTACACCCGTTCAGAATAATATGGCTGAGTTATGGGCTCTTCTTCACTTCATTATGCCAACTTTATTTGACAGCCATGAGCAGTTTAATGAGTGGTTTTCGAAAGGAATTGAGAACCATGCAGAACATGGGGGTACTTTGAATGAGCACCAACTTAATCGATTGCATTCAATTATAAAGCCTTTCATGCTGCGTCGTGTTAAAAAAGATGTAGTTTCCGAGCTGACTAGCAAAACTGAAATTACTGTGCACTGCAAGTTAAGTTCTCGGCAGCAGGCTTTCTATCAAGCAATTAAGAACAAGATATCTCTTGCTGAGTTGTTTGATAGTAATCGGGGACAGCTCAATGAGAAGAAAATCCTGAATTTAATGAACATTGTTATTCAACTAAGGAAGGTTTGCAACCATCCAGAGTTGTTTGAAAGGAGTGAGGGAAGCACATACCTTTACTTCGGAGAGATTCCAAATTCCCTTCCTCCTCCTCCATTTGGGGAGTTAGAGAATGTATATTATTCTGGTGGTCACAACCCCATCTCATATGAGATACCGAAACTTGTCTATCAAGAGATTATGCGGAGTTCTGAAACTCTCAGTTCAGCTGTTGGTCTTGGTTTCTGCAGAGGATCTTTTCTGAAGTATTTTAATATTTTTAGACCAGAAAATGTTTATCAATCTGTCTTCCCAGAAGATATGCATGTTAAAAGTGGAACCTTTGGGTTTACCCATTTGATGAATTTATCTCCACAAGAGGTGACGTTTCTGGTTAATGGTTCTTTTATGGAGCGATTATTATTTTCTATGATGAGATGGGACCAGAAATTTGTTGATGAAGTTGTAGACTTTCTTACGGAGACCATAGATGATGACCTGGAATGTGGTTACCTTGAAAAAGGAAAAGTGAGAACCGTCACACGAATGCTATTGGTGCCACCAAGATCTGAGACTAAGTTTCTTCAGAACAGATTGCCAACTGGACCCAGCCATGCTCCTTTTGAGGCGTTGATTGTCCCACATCAGGAGAGGCTTTTATCAAATGCAAGGCTTCTTCACTCAGCTTACACATATATCCCACCAAGTAGAGCCCCCCCAATCGGTGCTCACTGCTCTGATAGGAACTTTTACTATAAAATGATCGAGGAACTACATGATCCATGGGTTAAGAGGTTGTTTGTGGGATTTGCACGTACGTCTGATTTTAATGGGCCTAGCATGCCAGCTGGTTCTCATCATTTAATTCAAGAGATCGACTCTGAACAACTTGTTTGTAAGCCTGCTCTTCAGTTAACACACAGTATTTTTGGGTCATCTCCACCTATGCGAAATTTTGACCCTGCAAAATTGCTCACTGACTCTGGGAAGCTTCAAACACTTGATATATTATTGAAACGCTTACGAGCCGGAAATCATCGTGTTCTGTTGTTTGCTCAGATGACGAAGATGTTGAATATTTTGGAGGACTATATGAACTACAGAAAATATAAGTATTGTAGACTTGATGGATCAACATCTATTCAGGACCGCAGAGACATGGTCAGAGACTTTCAGCATAGGTCTGATATTTTCGTGTTCTTACTGAGTACAAGAGCCGGTGGATTGGGTATTAACTTGACAGCTGCTGACACAGTCATATTTTATGAGAGTGATTGGAATCCAACATTGGATCTACAGGCAATGGACAGAGCTCATCGTTTGGGTCAGACAAAAGATGTTACTGTCTACCGACTTATATGTAAAGAGACAGTCGAAGAGAAGATTCTTCTCAGAGCTAGTCAGAAAAGTACTGTACAAAACCTTGTCATGACTGGTGGTTCTGTTGGTGGTGATCTTTTAGCTCCTGAGGATGTGGTATCTTTGCTTCTTGATGATGTTCAGTTGCAGCAGAAATTTAAAGATATAACTGTCCAGGTAAGGGATAAGCAAAAGAAAAAACAAATGAAAGGTATTTTGGTAAATGAAGAAGGTGATGCATCTCTGGAAGATGTATCAAACTCTGTAGCCCTGGGAACAACAGATTCTGATCTTGCCGTTGACCCAGAGGGATCAAAGTCCAGTAATAAAAAGAGAAAATCTGCTTCAGATAAGAAAACTTTGAGGCCAAAGAATTCTCAAAAGACTAGTGAATTTGATACAACACCTATGATGGACAACGAATTGGATGATACTGATCCAGTGGTTCAGAAACCCAAGAGACCAAAGAGAATAAAGAAGAATGTGAATGAAATGTTTGAAGAGCCTCTTACTGGGACTGCTACCATGCGGACCCAATTTCAACCTCCACATGATGGTGGTTCCAAAATAGAATCAGGCCAAGGCACCTAA 4536 0.4127 MDHSTLFNLQSLVNFELPEYDDDFEYYGNSSQDESRITRGGAIGSHSNGNVSGRDVNLLKRSRSRNSDNEEKSGFYGTPMMEERYRSMLGDHIKQYKRRFKGNSSSPGQNQVTVPFAKNNNGLKAHKIGNERNRGLHDEETLSEWMNGSNAQKSGNFLDTDSIPQNRTNRVRYEPAYVDVGNGIAYKIPPIYDKLAPIVNLPSLSDIHVEDFFLKGTLDLGSLAEMMASDKKFGNRNRAGMGETVSQYESLQARLKDTSASHSTHKFSLKLSEADLNSSIPEGAAGRIKRSILSEGGILQVYYVKVLEKGDTYEIIERSLPKKQKVTKDPALIEKEEMEKFGKIWVNIARRDLPRYHRNFTTFHRKQVVDAKRAADICQREVKMKVSRSLKWTRTASMRTRKLARDMLLFWKRIDKEMLEVRKREEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKPISSEALSMADENTNDENALINSSAADPNEEEDPEEAELKKEALKAAQEAVSKQKMLTSAFDTECLRLRQAGESDSLQPEVSGASHIDLKTPSTMPVASTVRTPELFNGCLKDYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEEKNIWGPFLIVAPASVLNNWNEELERFCPELKVLPYWGGLSERTVLRKSMNPKDLYRREAKFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSIIKPFMLRRVKKDVVSELTSKTEITVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQLNEKKILNLMNIVIQLRKVCNHPELFERSEGSTYLYFGEIPNSLPPPPFGELENVYYSGGHNPISYEIPKLVYQEIMRSSETLSSAVGLGFCRGSFLKYFNIFRPENVYQSVFPEDMHVKSGTFGFTHLMNLSPQEVTFLVNGSFMERLLFSMMRWDQKFVDEVVDFLTETIDDDLECGYLEKGKVRTVTRMLLVPPRSETKFLQNRLPTGPSHAPFEALIVPHQERLLSNARLLHSAYTYIPPSRAPPIGAHCSDRNFYYKMIEELHDPWVKRLFVGFARTSDFNGPSMPAGSHHLIQEIDSEQLVCKPALQLTHSIFGSSPPMRNFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYCRLDGSTSIQDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILLRASQKSTVQNLVMTGGSVGGDLLAPEDVVSLLLDDVQLQQKFKDITVQVRDKQKKKQMKGILVNEEGDASLEDVSNSVALGTTDSDLAVDPEGSKSSNKKRKSASDKKTLRPKNSQKTSEFDTTPMMDNELDDTDPVVQKPKRPKRIKKNVNEMFEEPLTGTATMRTQFQPPHDGGSKIESGQGT* 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3483 1511 MobiDBLite consensus disorder prediction 28 76 - -
Mal3g3483 1511 MobiDBLite consensus disorder prediction 30 57 - -
Mal3g3483 1511 MobiDBLite consensus disorder prediction 1408 1511 - -
Mal3g3483 1511 SMART ultradead3 573 768 IPR014001 -
Mal3g3483 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 561 805 IPR027417 -
Mal3g3483 1511 Pfam DNA-binding domain 339 466 IPR020838 GO:0003677
Mal3g3483 1511 Gene3D - 1147 1406 IPR027417 -
Mal3g3483 1511 PANTHER HELICASE SRCAP-RELATED 8 1471 - -
Mal3g3483 1511 PANTHER CHROMATIN-REMODELING ATPASE INO80 8 1471 IPR031047 GO:0005634|GO:0006281|GO:0006338|GO:0006351|GO:0016887|GO:0031011
Mal3g3483 1511 Coils Coil 416 455 - -
Mal3g3483 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 1371 IPR027417 -
Mal3g3483 1511 CDD SF2_C_SNF 1183 1315 - -
Mal3g3483 1511 Pfam Helicase conserved C-terminal domain 1195 1304 IPR001650 -
Mal3g3483 1511 Pfam SNF2-related domain 592 879 IPR000330 GO:0005524|GO:0140658
Mal3g3483 1511 SMART helicmild6 1221 1304 IPR001650 -
Mal3g3483 1511 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 589 760 IPR014001 -
Mal3g3483 1511 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1195 1345 IPR001650 -
Mal3g3483 1511 Gene3D - 551 829 IPR038718 -
Mal3g3483 1511 ProSiteProfiles DBINO domain profile. 344 469 IPR020838 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3483 Mal-Chr3 111824354 111837321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3483 598 887 RAD5 or RAD16-like Gene Family AT5G43530 29.167 6.24e-26 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mal3g3483 SNF2_N 4.6e-67 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3483 K11665 - gmx:100780615 2435.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3483 3 111824354 111837321 Mal3g3483 3 111824354 111837321 ECH