Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3472 ATGGACAAAGATACATCAACTTGTTTTCAAATTCCTCAGGAATATGAATGTGTGCCAAATTGTGATGATGAATTAAAGCCTAAGATTGGACAAGTATTTGATACGTTAGAAGAAGGTAAAAAATTTTACGAAAAATACGCACTCTCTGTCGGATTTAGTGTGCGTTCATCATCATCAACTACAGATAAAAACGGTGTGAAGCGTTGGAAGTATTTTGTTTGCTCGAAAGAGGGTTATTTGCGAAATAAGACGGATGATAAGGAGCAAAGTGAATCTATTGTCAAGGCTAAAAGAAGAAGGGCTTTAACAAGAGAAGGATGCAATGCAAATGTTGTTTTCAAATGGGTGGGGGAAGGTAAGTATGAGATAGCTCGATTTCATGAAAGCCATACACATCCACTTGCTTCACCTATGAAGAGACCGTTTCTAAGGTCTGCAAGGAAAGTGAATTCCAGTCACAAAAGCTTATTACTTGCATGTAGTAGAGCAAATATTGGACCTTCAAAAGCTTTCCACTTATTAAAAGAACAGTGTGGGGGTTATGAAAATGTTGGATGCACGCAGAGAGATCTTCAAAACTATTCCAGAGATTTAAAGAGTTTGAATAAAGATTCTGATGCACATGTTTTGATAGATTACTTTAGAAGGAAGCAAGAAGTTAATCCATCCTTTTATTATGCGTATGAGGTAGGTGAAGAAGGCCGACTGAAGCATGTTTTTTGGGCAGATGGTATTTGTAGGAAAAATTATTCCTTGTTTGGGGATGTGGTTTCATTTGATACTACATATCAAACAAATAAATATCATTTGATTTTTGCACCTTTCACCGGGATAAACCATCATCGACAATCTATTACCTTCGGAGTAGGAGTTATAACAAATGAGAAAAGTGATTCATTTGTATGGTTGTTTGAAAAGTTTTTGGAAGCAATGGGTGGACATAAGCCAACTCTTATAATAACCGATCAAGATCCTTCCATGAAAATGGCTATAGAAAAGATTTTTGACACTTCTACTCATAGATTGTGCATGTGGCATATCATGAAAAAAGTTTCTGAAAAAGTAGGTGTTTCCACAAATGATGATGATGAGTTCAACAAAAGTTTCAGGTCATGTGTTTGGGGTTCAGAGACACCAAATGAGTTTGAAGAGACTTGGGAGTTTTTGATGACAAGGTTTGAGTTAGAAAAAAATAAATGGTTGTCACATATGTTTGAGATTCGAAGCATGTGGATCCCTGCATACTTCAAAGACATTTTTATGGCTGGGATATTGAGAACAACATCAAGATCAGAAAGTGAGAACTCTTTTTATGGTAATTTCCTAAATCCTAATGTTAGCTTGGTTGAATTTTGGATGAGGTTTGATTCAGCAATAGAAGCGCAACGACATAAGGAGTTACTGGCTGATAATAACTCAATTCATTCTAAACCGAAACTAAAGTTGGAACGTGGTATAGAGAGGCATGCAAGAGACGTGTATACTCGTGAGAACTTTTATATATTTCAAAATGAATTATGGATTGCATGTGTGGATTGTGGGATTGAAAATAAGAAAGATGAAGATGGGACAGAAATCTTTCATATATATGATAATAGTGAGATCAATGGTAAACTTCGAGAAGTGGTGTATAACTTGTCCGATCAAAATGCAAATTGCTCATGCAAAATGTTTCAGGCTGAAGGAATACCTTGTAGACACATACTTTGTGTTTTAAAGGGAAAAAATTTCAATGAAATACCAAGTAAGCACATTGTGAATAGGTGGACTAAGTTTGCAAACAAAACACCTATTTTTGACATAGCTGACAATGTCTTGGAAGAAGATAGCAAACTCATTTCTGATGTGTGGAACCACTTACATAGTTGTGTGGAGAAGGCTGGAAAAGATAAGGAAAAATTGCTTCTTGTGTTAGATGGGGCTGTTAACATGGAAAAACAATTGGACGAGTTTGAAGGGAGTTCTAAGAGAACCAAGACAAATGATTTGATTCTTGGGTCCAATATTCCTGACGAAGTAGAAATCCTTCCACCAAAATTTGCAAAGACTAAAGGTAGTGGTAAAAGAATCAAAGGTGGCAAAGAGAAGGCTATTGAACAACAACAAAAAAAAGCAAGACTTTGTAAGGCATGTGGTAAGTATGTGCATCATGACAGCCGCAATTGTCCCCAAAGATCATCTCCATAA 2187 0.3617 MDKDTSTCFQIPQEYECVPNCDDELKPKIGQVFDTLEEGKKFYEKYALSVGFSVRSSSSTTDKNGVKRWKYFVCSKEGYLRNKTDDKEQSESIVKAKRRRALTREGCNANVVFKWVGEGKYEIARFHESHTHPLASPMKRPFLRSARKVNSSHKSLLLACSRANIGPSKAFHLLKEQCGGYENVGCTQRDLQNYSRDLKSLNKDSDAHVLIDYFRRKQEVNPSFYYAYEVGEEGRLKHVFWADGICRKNYSLFGDVVSFDTTYQTNKYHLIFAPFTGINHHRQSITFGVGVITNEKSDSFVWLFEKFLEAMGGHKPTLIITDQDPSMKMAIEKIFDTSTHRLCMWHIMKKVSEKVGVSTNDDDEFNKSFRSCVWGSETPNEFEETWEFLMTRFELEKNKWLSHMFEIRSMWIPAYFKDIFMAGILRTTSRSESENSFYGNFLNPNVSLVEFWMRFDSAIEAQRHKELLADNNSIHSKPKLKLERGIERHARDVYTRENFYIFQNELWIACVDCGIENKKDEDGTEIFHIYDNSEINGKLREVVYNLSDQNANCSCKMFQAEGIPCRHILCVLKGKNFNEIPSKHIVNRWTKFANKTPIFDIADNVLEEDSKLISDVWNHLHSCVEKAGKDKEKLLLVLDGAVNMEKQLDEFEGSSKRTKTNDLILGSNIPDEVEILPPKFAKTKGSGKRIKGGKEKAIEQQQKKARLCKACGKYVHHDSRNCPQRSSP* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3472 728 ProSiteProfiles Zinc finger SWIM-type profile. 540 576 IPR007527 GO:0008270
Mal3g3472 728 Pfam FAR1 DNA-binding domain 41 135 IPR004330 -
Mal3g3472 728 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 192 611 - -
Mal3g3472 728 Pfam SWIM zinc finger 550 571 IPR007527 GO:0008270
Mal3g3472 728 Pfam MULE transposase domain 256 350 IPR018289 -
Mal3g3472 728 SMART 26again6 551 578 IPR006564 GO:0008270
Mal3g3472 728 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 18 151 - -
Mal3g3472 728 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 151 IPR031052 GO:0006355
Mal3g3472 728 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 192 611 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3472 Mal-Chr3 111721424 111724072 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g3472 FAR1 3.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3472 - - soe:110798711 787.334