Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3457 ATGGCAGTGGCTAACGATTCTCCGTCATGGAAATTTCACATTTTCTTGAGTTTCAGAGGAGAAGAAACTCGCAACAAATTCACCGATCACCTCTACACAGCATTCAACAGAACCGGCTTAACAGTTTTCAAGGACGACGTACAGCTTCAGAGAGGTGAAGTTATTGCTCCGGAGCTTCTCAATGCTATCGAGCAATCACTCTCTTCCGTGTTGATTCTCTCTCCCGACTACGCTTCTTCGCGGTGGTGCTTGGATGAGTTAGTTACCATTCTCCGATCTCGAATCGAATTCGGTCGTTATGTTTTTCCTGTGTTCTACGATGTGGATCCCACTGATGTGAGGCACCAGCGAGGTTCTTTCGCGCAGGCTTTTGTTAAGCATGGTGAAAGGTTTGGAGATGATAGTGACAAGGTTCGGATGTGGAGGGAGGCTTTGACTCAGGTTGCTGAGCTGTCTGGCTGGAGCTCCAAGGCTCGACGTGAAACAGAACTCATTGAAGAAATTGTTGCAGAAGTATGGAAAAAGTTACAACCTAAATTGCCACATTATGATGATGAACTGGTTGGAATTGATTCAAGGATGAACAACATCTGTTCACTTTTAAGGACAGAGTCTGATGAAATTCGCTTTACGGGGATATGGGGTATGGGTGGCATAGGAAAGACAACTCTAGCCAAATATGTCTACAAGAAAATCCATAACCAATTTGATATTAGTTGCTTTCTTGAGAATGTTAGAGAGGTTTCTAGTGAAAGAGATGGTCTGCTTTGTTTACAAAGAAAATTGCTTTCTCATCTAAAAATAAGCAGCTTGAGAATTGAAAGTTTGGACCAAGGAAAGGAGACAATACAGAATCTTTTATTCAATAAAAAAGTTCTCCTTGTCCTTGATGATCTAAGTTCTGATATCCAACTAGAGAATTTAGCTGGAAAGCAAGAATGGTTTGGTCCAGGGAGCAGGGTAATAATAACAACTAGAGACAAGCATCTCCTAGTACCACTAGGCTTGTGTGAAAGTTATGATGCTCAAATCTTAAACAGTGATGAATCCCTTCAACTTTTTTCTCGAAAAGCTTTTAGAAGCGGAAAACCTGAAGAAGGTTTCATAGAGTTGTCAAAACGGGTGGTTCAATGTGCTGGAGGTATTCCCTTGGCACTCAAAGTGTTGGGTTCATTCCTCTGTGGAAGGAAGGCATCTGTATGGGAAGAAGCTTTGAAAATGTTGCAGCAGGATCTGCAAAATGATATTTACAAGACATTAAAAATAAGTTATGATGGATTGCGGGATATGGAAAAGGCGATATTTCTAGATATTGCTTGTTTTTTCAAAGGGAGCCTCAAGGATCATGTAACAGAAATATTGAAAAATTGTGGTCTTAATCCATTGATTGGTATAGATGTTCTTATTGAAAAATCATTAATAACTTATGATGGGTGGCATTTGGGGATGCACGATTTGCTTCAAGAAATGGGTAGAAATATTGTTCTCCATGAATCTCTTAATGATGCCGGCAAGCGGAGTAGGTTGTGGTCTCTCAAGGACATTGATCAAGTATTGAGAAATAATAAGGGAACTGAATCTACTCAAGCAGTAGTTCTAAATCTGTCTGAAGCATTTGAAGCAAGTTGGAACCCTGAAGCTTTTGCAAAGATGGGGAATCTCAGATTGCTCATGATATTAAATAAATTGCAACTTCAACTTGGTCTCAAATGTCTTCCCAGTGGGTTAAAAGTTCTTGTATGGAAGGAATGTCCTCTCGAGTCATTGCCAATAGGAGACCAATCGGACGAACTTGTTGACCTTGATATGTGTCATAGCAAAATTAAGTACCTTTGGAAAGGAACAAAGCTTTTGGGAAATTTGAAGACCATCAATTTGAAAAACTCCAAATATCTTCATCAAACTCCAGATTTCACTGGAATTCCAAATCTTGAAAAATTGGATCTTGAAGGCTGCATAAACCTAGTTGAGGTTCATGCTTCTCTTGGACTTCTTAAAAAGATTTCATATGTGACATTAGAGGATTGCAAAAATCTTAAAAGCCTTCCGGGAAAATTGGAAATGAATTCTTTGAAGCGTCTCATTCTATCAGGCTGTACAGCAGTTAGAAAGTTTCCTGATTTTGGGGAAAGTATGACAAATCTATCCACACTTGCTTTGGATGAGATTCCCATAGCTGAACTACCTCCAACTATTGGTTACTTGACAGATCTTAATAGTTTGCTTTTACGGGATTGTAAAAATATTGTTTCTCTTCCAAATACCTTTTCTAATTTGAAATCTCTCAAAAGGCTCAATCTATCTGGTTGCTCAAAATTTTCCAAGCTTCCTGATAATTTGCATGAAAATGAGGCTTTGGAGTGTCTTAATGTGAGTGACACTGCTCTAAGCGAAGTTCCTTCATCCATTGTTCATTTGAAAAATCTTGTATCACTTTTATTTCACGGATGCAAAGGACTAGCACGGAACTCAGAGAGCTCACTCCTCCCTTTGAGTAAGATTTTCAGGTTTGGTACTCATCCAATTCCCAAGAAATTAATCTTACCTTCTTTTTCTGGTTTATCCTCATTGAAGAAACTAGACTTAAGCTATTGCAATCTCTATGATGAATCAATTCCCGATGATCTTGGTTGTTTATCTTCATTGGTAACATTAGATATAAGTGGGAATAATTTTGTGAACCTTCGTGATGGCTGCATATCGAAACTTTTGAAGCTAGAAAGACTTGTGTTGAGTAGTTGCCAAAACCTGCAGACATTGCCTAAGCTACCGCCAAATGTACATTTTGTTAATACAAGTGATTGTAGTTCAATGAAACCCTTATCAAATCCACAAGAGATATGGGGTCACTTGGCATCGTTTGCTTTTGATAAGTTGCAAGATGCAAATCCGATCAGAACTTTATTGGTATGTCCTGGAGACGAAATTCCATCAACTTTTTTCTATCAAAATTATTTTGACCGGGACATACAATATTTAAAAGATAACTACATATGGGCTGATTCTACCGTGTCAATATCGATAGACATAGCTCAACTTCGTCAACGGTGTGATAGAAGTGAATGGTGGGGAATTTTGGTTTCCCTTGTCATAGAAGATGTGGTGTCTTCTACACCTTCCCAAGACTATCGTGTTGGTTGGATTTCAAAAGTTCCTGCTACCAATAATATTTTGCGCCTGCTATGTCAAAAGTTGTTGGAGCATGGTTTCATTTCTGGAGTGCCAAATTCCAAGCATCCTCACCTATTGGTTTTGTATATTCCTGTTCCTGCATCCCGTTGGTCTTATGTTCAAGACAAGTTTCAGTTAATATTTTTCAGCTCTAGTCTTAAGAGTAAGTTAGTTATAAAGAAATGTGGGTGGCGCATATTATGTAAGGAAAATGCACAACTCATGCGCACAAAACTGTCTGAATGCAACACTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTGATTCTCTTATTGCATCATGGAGATGGATAAGCCGTCTCAAGGTTCCCCTATGTTACAAGACTTTCCTGTTGGCCGTCCTATGTGAACGCTTGCCTACTATTGCGAAGTGCAGGTTTTGCAGCATGGAAGGGGCTAGCACTATCCATGTTTTACGAGACTGTAGGCGAGCTTGTGCAATTTGGGTTCAAATGGTTCCTCCTCAAATGCAGGATGAGTTTTTTTCAATTTCACTTCATGAGTGGATGCATAGGTTCCTTCGTAGGTCCTGGTTGCTAAATAACTGCGAAGACTATGATGCCGACTGCTTGAAGTTTTCTGTCACCACTTTTCTGCTCTGGAAGGATGGAAATAATTCCATTCAAGAGGGAGATGCTCTAACAGATAATGGGTTGTATGCTATGATCAAGTCTCTAGTACAAGAACACACCTCACCTACCAGACATTTTATCAAGTTGAACGTGGATGGTTGTTGCATGGACAATCCTAGAAATGCTGGTTATGGGGGTCTCTTTCGTGATGTCGAGGGGAATTGGCTTGGTGGATTCTATGGCTCTTTGGGCTTTACAACTAATATGAAAGCTGAGCTTTATGCCATTTGTCAAGGTTTGATCACAGCTTGGGATTTGGGTTACAGAAATATATTAGTTGAAACTGATTCCTCGCAAGCTATCAATCACATTGAGGAGGCCAATATTGAGCATGATGCCTATGGTAGCTTGGTGGCTGACATACGCTCCCTCATGCAAAGAAATTGGTCCCTAAATTTGGTCCATTCTCTCAAGGAAGATAATGCTTGTGCAGATGTTTTATCGAGACTTGGAGCTGAGCAACATGAGGTCTATTGCTTCCATGCTTATCCACCCGAACAGCTTCAGCGGGCATTGTTGGCTGATGCCCTTCGTGTTAAACTTCCTTGCATGTAG 4386 0.3983 MAVANDSPSWKFHIFLSFRGEETRNKFTDHLYTAFNRTGLTVFKDDVQLQRGEVIAPELLNAIEQSLSSVLILSPDYASSRWCLDELVTILRSRIEFGRYVFPVFYDVDPTDVRHQRGSFAQAFVKHGERFGDDSDKVRMWREALTQVAELSGWSSKARRETELIEEIVAEVWKKLQPKLPHYDDELVGIDSRMNNICSLLRTESDEIRFTGIWGMGGIGKTTLAKYVYKKIHNQFDISCFLENVREVSSERDGLLCLQRKLLSHLKISSLRIESLDQGKETIQNLLFNKKVLLVLDDLSSDIQLENLAGKQEWFGPGSRVIITTRDKHLLVPLGLCESYDAQILNSDESLQLFSRKAFRSGKPEEGFIELSKRVVQCAGGIPLALKVLGSFLCGRKASVWEEALKMLQQDLQNDIYKTLKISYDGLRDMEKAIFLDIACFFKGSLKDHVTEILKNCGLNPLIGIDVLIEKSLITYDGWHLGMHDLLQEMGRNIVLHESLNDAGKRSRLWSLKDIDQVLRNNKGTESTQAVVLNLSEAFEASWNPEAFAKMGNLRLLMILNKLQLQLGLKCLPSGLKVLVWKECPLESLPIGDQSDELVDLDMCHSKIKYLWKGTKLLGNLKTINLKNSKYLHQTPDFTGIPNLEKLDLEGCINLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLEMNSLKRLILSGCTAVRKFPDFGESMTNLSTLALDEIPIAELPPTIGYLTDLNSLLLRDCKNIVSLPNTFSNLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSDTALSEVPSSIVHLKNLVSLLFHGCKGLARNSESSLLPLSKIFRFGTHPIPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQTLPKLPPNVHFVNTSDCSSMKPLSNPQEIWGHLASFAFDKLQDANPIRTLLVCPGDEIPSTFFYQNYFDRDIQYLKDNYIWADSTVSISIDIAQLRQRCDRSEWWGILVSLVIEDVVSSTPSQDYRVGWISKVPATNNILRLLCQKLLEHGFISGVPNSKHPHLLVLYIPVPASRWSYVQDKFQLIFFSSSLKSKLVIKKCGWRILCKENAQLMRTKLSECNTSSSFSSSSSSSSSDSLIASWRWISRLKVPLCYKTFLLAVLCERLPTIAKCRFCSMEGASTIHVLRDCRRACAIWVQMVPPQMQDEFFSISLHEWMHRFLRRSWLLNNCEDYDADCLKFSVTTFLLWKDGNNSIQEGDALTDNGLYAMIKSLVQEHTSPTRHFIKLNVDGCCMDNPRNAGYGGLFRDVEGNWLGGFYGSLGFTTNMKAELYAICQGLITAWDLGYRNILVETDSSQAINHIEEANIEHDAYGSLVADIRSLMQRNWSLNLVHSLKEDNACADVLSRLGAEQHEVYCFHAYPPEQLQRALLADALRVKLPCM* 1462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3457 1461 Gene3D - 1303 1431 IPR036397 GO:0003676
Mal3g3457 1461 PRINTS Disease resistance protein signature 757 773 - -
Mal3g3457 1461 PRINTS Disease resistance protein signature 210 225 - -
Mal3g3457 1461 PRINTS Disease resistance protein signature 379 393 - -
Mal3g3457 1461 PRINTS Disease resistance protein signature 286 300 - -
Mal3g3457 1461 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 713 987 IPR044974 GO:0006952
Mal3g3457 1461 SMART till_3 11 151 IPR000157 GO:0007165
Mal3g3457 1461 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 154 IPR035897 -
Mal3g3457 1461 SUPERFAMILY L domain-like 532 927 - -
Mal3g3457 1461 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 713 987 - -
Mal3g3457 1461 ProSiteProfiles RNase H type-1 domain profile. 1300 1430 IPR002156 GO:0003676|GO:0004523
Mal3g3457 1461 SUPERFAMILY "Winged helix" DNA-binding domain 415 519 IPR036390 -
Mal3g3457 1461 Gene3D - 6 176 IPR035897 -
Mal3g3457 1461 SUPERFAMILY Ribonuclease H-like 1302 1432 IPR012337 -
Mal3g3457 1461 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 716 IPR044974 GO:0006952
Mal3g3457 1461 CDD RNase_H_like 1306 1426 IPR044730 -
Mal3g3457 1461 Pfam Reverse transcriptase-like 1307 1426 IPR002156 GO:0003676|GO:0004523
Mal3g3457 1461 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Mal3g3457 1461 Gene3D Ribonuclease Inhibitor 841 1008 IPR032675 -
Mal3g3457 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 438 IPR027417 -
Mal3g3457 1461 Pfam NB-ARC domain 194 428 IPR002182 GO:0043531
Mal3g3457 1461 Pfam TIR domain 11 186 IPR000157 GO:0007165
Mal3g3457 1461 Pfam Leucine Rich Repeat 598 616 IPR011713 -
Mal3g3457 1461 SMART LRR_typ_2 712 735 IPR003591 -
Mal3g3457 1461 SMART LRR_typ_2 759 783 IPR003591 -
Mal3g3457 1461 SMART LRR_typ_2 879 902 IPR003591 -
Mal3g3457 1461 SMART LRR_typ_2 854 878 IPR003591 -
Mal3g3457 1461 Gene3D - 344 428 IPR042197 -
Mal3g3457 1461 Gene3D Ribonuclease Inhibitor 511 837 IPR032675 -
Mal3g3457 1461 Gene3D - 177 335 IPR027417 -
Mal3g3457 1461 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3457 Mal-Chr3 111525487 111531144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3457 7 814 WRKY Transcription Factor Family AT4G12020 31.280 4.84e-98 347