Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3449 ATGGATGCATTCGATGATGACCCTCTCGCGACATCGATTAATCTCCAAAGGCATTGCTATGGTGAATTTTCCAGTGCTGCTGTTCAAGCCAACACATCAATGGAAGACCAAAGCCAAGTTGAAGTTGCCTCTAAAAGTGCACTCTTTCTTGGTGTTTACGACGGCCATGGTGGCGTTGATGCTTCCCGGTTCCTCTGTGAACACCTCTTCGACAATCTACTGAGGATTGCTAATGAGAATGAAAATACTATTACTCAAGCTAATTTGAGCAATGCTGTTTCTACTACTGAAGATGGTTTTTTGGATTTTGTGAAAACAAATTATATTGTCGATCCAAATCTTGGAAAAGTTGGTTCATGCTGTCTTGCTGGAATTATATGGAAAGGGACACTGCATGTTGCGAATCTTGGAGATTCACGTGCTGTAATTGGTACTATGATTAATAAGAAAATCCATGCTGAGCAGTTGACAAGAGATCACAATTGTAATGATCAAACTATTAGAGAAGAGCTCAAGTCAATGCATCTAGATGATCCTACCATTGTGATGGAAAAGAATGGAGCATGGCGCGTTAAAGGCATCATTATGGTTAGTAGAACTATTGGTGATGCATATCTGAAGAGACCTGAATTTACTTTGTGCGAATCGTTCCCCAAATTTCAAAAAGTGCCTGAACCTTTTACTAGAGGTGTGGTATCAGCAGAACCAGAGATGCGTTCTAGAGTTCTAACGGATAGTGATAAGTTTCTGATATTTGCTTCTGATGGACTTTGGGATTTAATGTCAAATGAGGAAGCCGCTGAAATTGTACAAAAGAATCCAAGAAATGGAATTGCGAAAAGGCTTCTGAGTACTGCTCTAGCGGAAGCTGCTAGAAGAAGGGAAGTTACCTATAGGAACATGATGGCTGCTGATCCAGGGCGTGACAGCAGGAGGACTTTTCATGATGATATAAGTGTGATTGTTGTGTTCTTGGACAAAACGTCGTTTCTGAGGAAGCGCGTACGTAATTTGTCCTACAAAGGCTCATCTGACATGCCTACACGGTCAGCATTTGCACGGTCTGGTTTAATCGTTCCAAGGCTGCAGTTTTTGAACCCTCAGAGGCTGAAGGAGAGTATTAAAGGCCGGTTTAAATTAGGTTCATCGCATGCATCTAGCTCTCAGGCTCAGGGCCCTCAAAGTCCTCGGACTCCTCTGGCTCAGAACCCTCAAACCCCTGAGGCTGAGGATTCTCAGGCTGTCAGCCTTTTGGGTCAGAGTTCTTATGCTCAGAGTCGTTGGAAGAATGTTGAACTGAAGTTTTCACCGAAGCGAAGATAG 1323 0.4301 MDAFDDDPLATSINLQRHCYGEFSSAAVQANTSMEDQSQVEVASKSALFLGVYDGHGGVDASRFLCEHLFDNLLRIANENENTITQANLSNAVSTTEDGFLDFVKTNYIVDPNLGKVGSCCLAGIIWKGTLHVANLGDSRAVIGTMINKKIHAEQLTRDHNCNDQTIREELKSMHLDDPTIVMEKNGAWRVKGIIMVSRTIGDAYLKRPEFTLCESFPKFQKVPEPFTRGVVSAEPEMRSRVLTDSDKFLIFASDGLWDLMSNEEAAEIVQKNPRNGIAKRLLSTALAEAARRREVTYRNMMAADPGRDSRRTFHDDISVIVVFLDKTSFLRKRVRNLSYKGSSDMPTRSAFARSGLIVPRLQFLNPQRLKESIKGRFKLGSSHASSSQAQGPQSPRTPLAQNPQTPEAEDSQAVSLLGQSSYAQSRWKNVELKFSPKRR* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3449 440 PANTHER ALPHABET, ISOFORM E-RELATED 5 336 - -
Mal3g3449 440 Gene3D - 9 333 IPR036457 -
Mal3g3449 440 CDD PP2Cc 20 325 IPR001932 -
Mal3g3449 440 SUPERFAMILY PP2C-like 23 326 IPR036457 -
Mal3g3449 440 Pfam Protein phosphatase 2C 42 295 IPR001932 -
Mal3g3449 440 ProSitePatterns PPM-type phosphatase domain signature. 49 57 IPR000222 GO:0043169
Mal3g3449 440 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 5 336 - -
Mal3g3449 440 SMART PP2C_4 15 323 IPR001932 -
Mal3g3449 440 MobiDBLite consensus disorder prediction 379 416 - -
Mal3g3449 440 ProSiteProfiles PPM-type phosphatase domain profile. 22 325 IPR001932 -
Mal3g3449 440 MobiDBLite consensus disorder prediction 380 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3449 Mal-Chr3 111467643 111469346 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3449 9 353 PP2C-type Phosphatase Gene Family AT5G06750 51.136 3.28e-117 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3449 K01102 - csv:101222146 367.466