Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3447 ATGCATCCTTGGCTTGAAAGTTTAGTTAATGTATGCAGGAACAGGAAGAATGACAACATGGCTGCATTCGACGATGACCCTCTCGCGGCATCGATTAATCTCCAAAGGCATTGCTATGGAGAATTTTCCAGTGCTGCTGTTCAAGCCAACACATCAATGGAAGACCAAAGCCAAGTTGAAGTTGCCTCTAAAAGTGCACTCTTTCTTGGTGTTTACGACGGCCATGGTGGCGTTGATGCTTCCCGGTTCCTCTGTGAACACCTCTTCGACAATCTACTGAGGATTGCTAATGAGAATGAAAATACTATTACTCAAGCTAATTTGAGCAATGCTGTTTCTGCTACTGAAGATGGATTTTTGGATTTTGTGAAAACCAATTATATTGTCGATCCAAATCTTGGAAAAGTTGGTTCATGCTGTCTTGCTGGAATTATATGGAAAGGGACACTGCATGTTGCGAATCTTGGAGATTCACGTGCTGTAATTGGTACTATGATTAATAAGAAAATCCATGCTGAGCAGTTGACAAGAGATCACAATTGTAATGATCAAACTATTAGAGAAGAGCTCAAGTCAATGCATCTAGATGATCCTACCATTGTGATGGAAAAGAATGGAGCATGGCGCGTTAAAGGCATCATTATGGTTAGTAGAACTATTGGTGATGCATATCTGAAGAGACCTGAATTTACTTTGTGCGAATCGTTCCCCAAATTTCAAAAAGTGCCTGAACCTTTTACTAGAGGTATGGTATCAGCAGAACCAGAGATGCGTTCTAGAGTTCTAACGGATAGTGATAAGTTTCTGATATTTGCTTCTGATGGACTTTGGGATTTAATGTCAAATGAGGAAGCCGCTGACATTGTACAAAAGAATCCAAGAAATGGAATTGCAAAAAGGCTTCTGAGTACTGCTCTAGCGGAAGCTGCTAGAAGAAGGGAAGTTACCTATAGGAACATGATGGCTGCTGATCCAGGGCGTGACAGCAGGAGGACTTTTCATGATGATATAAGTGTGATTGTTGTGTTCTTGGACAAAACGTCGTTTCTGAGGAAGCGCGTGCATAATTTGTCCTACAAAGGCTCATCTGACATGCCTACACGGTCAGCATTTGCACGGTCTGGTTTAATCGTTCCAAGGCTGCAGTTTTTGAACCCTCAGAGGCTGAAGGAGAGTATTAAAGGCCGGTTTAAATTAGGTTCATCGCATGCATCTAGCTCTCAGGGCCCTCAAAGTCCTCGGACTCCTCTGGCTCAGAACCCTCAATCCCCTGAGGCTGAGGATTCTCAGGCTGTCAGCCTTTTGGGTCAGAGTTCTCGTGCTCAGAGCCGTTGGAAGAATGTTGAACTGAAGTTTTCACCGAAGCGAAGATAG 1374 0.4323 MHPWLESLVNVCRNRKNDNMAAFDDDPLAASINLQRHCYGEFSSAAVQANTSMEDQSQVEVASKSALFLGVYDGHGGVDASRFLCEHLFDNLLRIANENENTITQANLSNAVSATEDGFLDFVKTNYIVDPNLGKVGSCCLAGIIWKGTLHVANLGDSRAVIGTMINKKIHAEQLTRDHNCNDQTIREELKSMHLDDPTIVMEKNGAWRVKGIIMVSRTIGDAYLKRPEFTLCESFPKFQKVPEPFTRGMVSAEPEMRSRVLTDSDKFLIFASDGLWDLMSNEEAADIVQKNPRNGIAKRLLSTALAEAARRREVTYRNMMAADPGRDSRRTFHDDISVIVVFLDKTSFLRKRVHNLSYKGSSDMPTRSAFARSGLIVPRLQFLNPQRLKESIKGRFKLGSSHASSSQGPQSPRTPLAQNPQSPEAEDSQAVSLLGQSSRAQSRWKNVELKFSPKRR* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3447 457 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 12 356 - -
Mal3g3447 457 SUPERFAMILY PP2C-like 47 345 IPR036457 -
Mal3g3447 457 MobiDBLite consensus disorder prediction 398 457 - -
Mal3g3447 457 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Mal3g3447 457 Pfam Protein phosphatase 2C 61 314 IPR001932 -
Mal3g3447 457 ProSiteProfiles PPM-type phosphatase domain profile. 41 344 IPR001932 -
Mal3g3447 457 MobiDBLite consensus disorder prediction 399 446 - -
Mal3g3447 457 PANTHER ALPHABET, ISOFORM E-RELATED 12 356 - -
Mal3g3447 457 CDD PP2Cc 39 344 IPR001932 -
Mal3g3447 457 SMART PP2C_4 34 342 IPR001932 -
Mal3g3447 457 Gene3D - 23 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3447 Mal-Chr3 111434471 111436225 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3447 28 372 PP2C-type Phosphatase Gene Family AT5G06750 50.852 2.14e-116 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3447 K01102 - csv:101222146 372.089