Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3439 ATGGATATTTCAAACAATTTGAACAGTGTTGATAGTAATGTTCATGGTGAAGTTAATATAGTTGGTAACTTTAATGGTGAACTTGCAAGTTTAGAGCCTATAGAAGGGATGAATTTTTCTTCTATAGATGAAGTGAAATCATTTTATGGAAAGTATGCTTCTGCGAAGGGTTTTGGATGGAAGATCAGATCATCAAAGAAAGGAAAGGATGGAGAAGTAAATTATGTAATGTTATCATGCTCAAGAGAAGGACATCGTGTCTCAGGAATACCGTGTACACTGAAGACACTTCCAACTAAAGTGAAAAATTGTCCTGCAAAAATTACTACTAAGTTGGCAAACGATGGATTGTGGCATATTAAAAAGTTCGAACCTAACCACTCTCATGCTATTAGCCCTACAAAGTCAAGGTTGTTCAAGGCTAACAAGAATATGAACATGCATGTAAAGAGAACAATCCAAATCAATGATGATGCAGGGGTGAGGATCAACAAGACTTTTCAATCTCTTGTCACAGATGCTGGAGGTCATGAAAATATAACATTTTGTGAAAGAGATGTAAGGAATTTCGTTAATAAGGAAAGGCGTCTATTTTGTCGAATGAGGGAACAAAATATAAATTTCTTCTATGATATAGACTTGGATGATGACTTTCATGTACGAAACATGTTTTGGGCTGATGCAAGAAGCAGGGCTACATATGAATCTTTTGGAGATGTTGTGACTTTTGATACAACATATTTGACAAATAAGTATGACATGCCTTTTGCTGCATTTGTTGGTGTAAACCATCATGGTCAATCAACTTTGCTTGGATGTGGTCTACTTTCAGCTGAAGACACAAACTCATTCGTATGGCTTTTTCAATCTTGGCTTCGTTGTATGTTAGGAAAGGCCCCAATAGGTATTATCACTGACCAGTGTAAAGCTATGAAAAATGCCATTGAGTTAGTCTTTCCTACAACTATACATAGGTGGTGTTTATGGCATATAATGAAAAAAATTCCTGAAAAGCTAAGTAAATATGGTGAATACAAAAAGATAAAGTGTGTAATGAAAGAAACGGTTTATGATACAATCACACCAACTGAATTTGAAGAAAAGTGGTGTTCTTTTGTCAACAAATTTGAGCTAGAACATAATGATTGGTTGAATGGGTTGTACAAGGAGCGTCATAGATGGGTACCAATTCTGTTGAAGAAATATTTTTGGGCAGGTATGTCGACAACACAACGAAGTGAGAGCATACATGCTTTCTTTGATGGGTATATCAATTCAACGACTAGTTTGCAACAATTTGTAAAGCAGTATGATAATGCTCTCAGAAGTAGAGCAGAAAAGGAATTTGAAGCTGATTTTCAATCAATGGATACAATAATTCCTTGTGGGTCAAACTCGTCAATCGAAAAACAGTTCCAAGTAGAATACACCCATGCCAAGTTTAAGGAGGTTCAAGCAGAATTTAGAGCTAAAATGAATTGTGTGCTCTCCTCAAAGCTTATGGAGGGTGAAATTGCTACTTACAATGTTCAGAACCTATTTTGTTCCAACAAAGATGGTATCTTTAAAGTTACTTTTAATCATCACAATCATGATGTCAGTTGTGAATGCTCATTTTTTGAGTTTAGAGGTATTTTGTGTCGTCATGTGTTGATTGTCTGTGCTCTAGAAAAGGTTAAAAATGTTCCAGTTAAGTATGTTTTAGCAAGATGGAGCAAAAATATTAAAAGGAAGCATTCATATATTAAGAGCAGCTATAGTGTAACAAAGTTGAAGCCACAAATGGACAGATTTGACAACTTGTGCAAGCATTTCTATGAGATTGCTGAAGAAACTGCAGGGTCTGAAGATGCAACTAAGATTCTCCATGAAGTATTATCTGAATTTAAATCTAATTTGCATTCCTTGTGTGCTACAAGTGTTGGTATTAATTTACAATCCATTGCGAGTCCATTGCAAGTCCAAAGGGATGAAAATTTGATCCCTGAAATTCGCAGCCCATTGCGAGTCGTCCGTAAAGGTCGTCCTCCATCAAAGAGAAAAATGTCTACAGTTGAAAAGGTCGTGCAGAGATGCAGGAAGCGAACCAATAAAAGTCGAGCCAAATTAACAACTAAGGCATGTGCTTATTTTCAAATAGTATAG 2145 0.3594 MDISNNLNSVDSNVHGEVNIVGNFNGELASLEPIEGMNFSSIDEVKSFYGKYASAKGFGWKIRSSKKGKDGEVNYVMLSCSREGHRVSGIPCTLKTLPTKVKNCPAKITTKLANDGLWHIKKFEPNHSHAISPTKSRLFKANKNMNMHVKRTIQINDDAGVRINKTFQSLVTDAGGHENITFCERDVRNFVNKERRLFCRMREQNINFFYDIDLDDDFHVRNMFWADARSRATYESFGDVVTFDTTYLTNKYDMPFAAFVGVNHHGQSTLLGCGLLSAEDTNSFVWLFQSWLRCMLGKAPIGIITDQCKAMKNAIELVFPTTIHRWCLWHIMKKIPEKLSKYGEYKKIKCVMKETVYDTITPTEFEEKWCSFVNKFELEHNDWLNGLYKERHRWVPILLKKYFWAGMSTTQRSESIHAFFDGYINSTTSLQQFVKQYDNALRSRAEKEFEADFQSMDTIIPCGSNSSIEKQFQVEYTHAKFKEVQAEFRAKMNCVLSSKLMEGEIATYNVQNLFCSNKDGIFKVTFNHHNHDVSCECSFFEFRGILCRHVLIVCALEKVKNVPVKYVLARWSKNIKRKHSYIKSSYSVTKLKPQMDRFDNLCKHFYEIAEETAGSEDATKILHEVLSEFKSNLHSLCATSVGINLQSIASPLQVQRDENLIPEIRSPLRVVRKGRPPSKRKMSTVEKVVQRCRKRTNKSRAKLTTKACAYFQIV* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3439 714 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 629 IPR031052 GO:0006355
Mal3g3439 714 ProSiteProfiles Zinc finger SWIM-type profile. 522 558 IPR007527 GO:0008270
Mal3g3439 714 Pfam MULE transposase domain 240 334 IPR018289 -
Mal3g3439 714 Pfam SWIM zinc finger 534 554 IPR007527 GO:0008270
Mal3g3439 714 PANTHER OS03G0843700 PROTEIN 32 629 - -
Mal3g3439 714 Pfam FAR1 DNA-binding domain 47 132 IPR004330 -
Mal3g3439 714 SMART 26again6 533 560 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3439 Mal-Chr3 111333589 111345302 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g3439 MULE 1.3e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3439 - - gmx:102667848 769.229