Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3436 ATGCCAAGTTCGAAGCGGAAAAAGTTTTTCTTAGTCGCCAAACATCGGAAGAGAGAAAAAAAATCGGAGGCGTGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTTGCACCTGTTCAAAGACAAAGAGTGACACTTCTAATAGAAGCTTTTGAAACAATTCGGCCATTTCAAGATGCTGAAAATGGATCGCATTCTTCTGCAACAGTGGAATCTCAGGCAAATCCAATTCAATCACTTGATGCTTCCTCAAATCACAACGGCGGAAGGGATTCAGTTTTATCTGCTAAGTCATTGCTTGAAAAGCGGGAAGAGGAAAATTCAAGAATTCACCGATTCCATATCCCACAAACACTTCAACCTAGTTTTCCATCTGATTCCATATCCCAATTTCAACCTAGTTTTCAACCCTCTCTGATTCCATCAATGGAAAAACCTTCAATGGATGATTCTGACGCAGCAGCCCTAGGGTCTCTGGTGGTCGAACGGAAACACGGCGAAAACTCTGCGCAATGTACATGGAGTGTGAAGTGTCCCAACGATCAACTCCGTGCCATATGGAGCAAATTCTTCCACGTTGGTGAGTATCGCTGTAGGTTGTTCATGCACCGAACCCGTGCACCAAGAGATTCTCTCGCACTTTACATACAGTTTGTTTCCCCTGTTTCCAATTCGGTACATGGTTTCACAGCCTATGCTTTGTCAATTTCAAACTCTGATGATCTTAACTCAAGCAACAAAACTCTTCGCCAAGCGTGGCATAGGATCTGTCCTACTAAGAAATCTTATGGGTGGTGTGATTTCGCTACGGCTTCGAGTTTCGGTGAATCTTTTACTGTAAGAACTGACGTTCTTATTCTTGATGAATCTTTTGAGTTTTTGCCGTTGAGGGCTGCTATTTTGAAGAAATACAATTCTGCTGATCAGTTTGGAAGGTTAACTTGGAAGATACATAACTTTTCAAACACGTTGGATGCAATGAAGGGGATGAACGATATATCCATAAGGAGTTCGACGTTTCAGATCGCAGATAACGACTTTCAGATTATTGTTTACCCAGCCAACCATGCATCAGTTCCATATTCAGTTATTCACTACCATCCAATTGGTGATGCCGCCATTAATGCCAATGTTGAAGAAGACTAA 1152 0.4184 MPSSKRKKFFLVAKHRKREKKSEAWMLDYALQKVISKLAPVQRQRVTLLIEAFETIRPFQDAENGSHSSATVESQANPIQSLDASSNHNGGRDSVLSAKSLLEKREEENSRIHRFHIPQTLQPSFPSDSISQFQPSFQPSLIPSMEKPSMDDSDAAALGSLVVERKHGENSAQCTWSVKCPNDQLRAIWSKFFHVGEYRCRLFMHRTRAPRDSLALYIQFVSPVSNSVHGFTAYALSISNSDDLNSSNKTLRQAWHRICPTKKSYGWCDFATASSFGESFTVRTDVLILDESFEFLPLRAAILKKYNSADQFGRLTWKIHNFSNTLDAMKGMNDISIRSSTFQIADNDFQIIVYPANHASVPYSVIHYHPIGDAAINANVEED* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3436 383 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 298 367 IPR008974 GO:0005515
Mal3g3436 383 PANTHER TRAF-LIKE FAMILY PROTEIN 154 356 - -
Mal3g3436 383 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 161 292 IPR008974 GO:0005515
Mal3g3436 383 PANTHER TRAF-LIKE FAMILY PROTEIN 307 365 - -
Mal3g3436 383 PANTHER TRAF-LIKE FAMILY PROTEIN 307 365 - -
Mal3g3436 383 SUPERFAMILY TRAF domain-like 314 358 - -
Mal3g3436 383 SUPERFAMILY TRAF domain-like 183 292 - -
Mal3g3436 383 CDD MATH 188 289 IPR002083 GO:0005515
Mal3g3436 383 Pfam Plant calmodulin-binding domain 6 56 IPR012417 GO:0005516
Mal3g3436 383 PANTHER TRAF-LIKE FAMILY PROTEIN 154 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3436 Mal-Chr3 111268161 111270900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3436 20 58 Calmodulin-binding Proteins AT2G38800 58.974 1.85e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3436 - - mtr:MTR_7g090500 124.02