Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3432 ATGGTTGCATTCTGCCCACCTCAGATCTCATACTCAAACATGGGATGGCTCTTAGAGGATTTGGAGCCAGAGTCCTTAATTAGTCATAAGGAGAAGAATTATGTATCATTAGAGTATTCGTTACCATATCATCAATTCTCTTCACCAAAGCAACATGTTGATGTTGAGATTGAAAAGCCATCATCCCCTAAACTTATGGCCAAGAAGCTTAACCACAATGCTAGTGAACGTGATCGCCGCAAGAAGATTAATAGCTTGATTTCTTCACTTCGTTCACTTCTTCCCGGTGAAGATCAAACGAAAAAAATGAGCATTCCGGTGACAATTTCACGAGTCTTAAAGTATATACCGGAATTACAAAAGCAGGTAGAAGGACTAACTAAGAAAAAAGAAGGGTTTCTATCAAGAATTTCTCGTCAAGAATATGAAGTGAACAAAGAATCACAAAGGAAAATTCCAAATTACAATTCTTCTTCTTTTGTAGTTTCATCAAGTAGGCTTAATGACACTGAGCTTGTTATTCATATTTCATCTAATGAGCCCTACAACATTCCTCTATCTGAGATCTTGATGTGTTTAGAAAATAATGGACTTTTTCTTCTAAATTCTTCTTCTTCTAAAACCTTTGGAGGGAGGCTCTTCTATAACTTGCATTTTCAGGTGGAGAAAACTCAAAGATTAGAGTGTGATGTTCTAATTCAGAAGCTTTTGTCAATATATGAGAACCAGCGAAGTAATCAATTAATGTTGGGCTCTAAAAATCAAACAATCAATAGTGTTCTGATATATTAA 792 0.3561 MVAFCPPQISYSNMGWLLEDLEPESLISHKEKNYVSLEYSLPYHQFSSPKQHVDVEIEKPSSPKLMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPELQKQVEGLTKKKEGFLSRISRQEYEVNKESQRKIPNYNSSSFVVSSSRLNDTELVIHISSNEPYNIPLSEILMCLENNGLFLLNSSSSKTFGGRLFYNLHFQVEKTQRLECDVLIQKLLSIYENQRSNQLMLGSKNQTINSVLIY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3432 263 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 242 IPR015660 GO:0003700|GO:0006357
Mal3g3432 263 SMART finulus 73 125 IPR011598 GO:0046983
Mal3g3432 263 Pfam Helix-loop-helix DNA-binding domain 68 120 IPR011598 GO:0046983
Mal3g3432 263 PANTHER TRANSCRIPTION FACTOR ORG2-RELATED 1 242 - -
Mal3g3432 263 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 137 IPR036638 GO:0046983
Mal3g3432 263 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 119 IPR011598 GO:0046983
Mal3g3432 263 Gene3D - 61 151 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3432 Mal-Chr3 111224002 111225341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3432 1 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.270 5.41e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal3g3432 HLH 1.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3432 - - gmx:100803424 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3432 3 111224002 111225341 Mal3g3432 3 111224002 111225341 ECH