Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3431 ATGGTTGCATTCTGCCCACCTCAGTTCTCATACTCAAACATGGGATGGCTCTTAGAGGAGTTGGAGCCAGAGTCCTTAATTAGTCATAAGGAGAAGAACTATGCATCCTTAGAGTACTCATTACCGTATAATCAATTCTCTTCACCAAAGCAACATGTTGATGTTGAGATTGAAAGGCCACAATCCCCTAAGCTTATGGCCAAAAAGCTTAACCACAATGCTAGTGAACGTGATCGCCGCAAGAAGATTAATAGCTTGATTTCTTCACTTCGTTCACTTCTTCCCGGTGAAGATCAAACGAAAAAGATGAGCATCCCGGCAACAATTTCACGAGTCTTAAAATACATACCAGAATTACAAAAGCAGGTGGAAGGACTAACTAAGAAAAAAGAAGGGTTTCTATCAAGAATTTCTCGTCAAGAATATGAAGTGAACAAAGAATCGCAAAGGAAAATTCCCAATTACAATTCTTCTTTTGTAGTTTCAACAAGTAGGCTTAATGATTCTGAGCTTGCTATTCATATTTCATCTAATGAGTCCTACAAAATTCCTCTATCTGAGATCTTGATGTGTTTAGAAAATAATGGGCTTCTTCTACTAAATTCTTCTTCTTCTAAAACCTTTGGAGGGAGGCTCTTCTATAACTTGCATTTTCAGGTGGATAAAGCTCAAAGATTAGAATGTGATGATCTAATTCAGAAGATTTCGTCAATATATGAGAAGCAGCGAAGTAATCATTTAGTGTTGGGTGCTATGGATCAAACGATCATGAGTAGTGTTCTGATATACTAG 792 0.375 MVAFCPPQFSYSNMGWLLEELEPESLISHKEKNYASLEYSLPYNQFSSPKQHVDVEIERPQSPKLMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPATISRVLKYIPELQKQVEGLTKKKEGFLSRISRQEYEVNKESQRKIPNYNSSFVVSTSRLNDSELAIHISSNESYKIPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKAQRLECDDLIQKISSIYEKQRSNHLVLGAMDQTIMSSVLIY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3431 263 SMART finulus 73 125 IPR011598 GO:0046983
Mal3g3431 263 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 119 IPR011598 GO:0046983
Mal3g3431 263 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 137 IPR036638 GO:0046983
Mal3g3431 263 PANTHER TRANSCRIPTION FACTOR ORG2-RELATED 1 241 - -
Mal3g3431 263 Gene3D - 61 151 IPR036638 GO:0046983
Mal3g3431 263 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 241 IPR015660 GO:0003700|GO:0006357
Mal3g3431 263 Pfam Helix-loop-helix DNA-binding domain 68 120 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3431 Mal-Chr3 111211133 111213033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3431 1 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 40.239 6.11e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal3g3431 HLH 5.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3431 - - gmx:100803424 270.781