Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3408 ATGGTCATCAACAGATTGAAGAGAGAGCAATGTGACCGAACAAAACACGATTCTAGTTTCTCCCGCTGGAAGATTCTTATTGGTCCTTCTGATTGGGAAGACCATTCCAAAGGAAAGGATGGATCTGCCAGATACAGGATTCACAACCTTCCTCAGAAATTGGGTCCAGGAGTGTACGAGCTTGGAGTAGCTGTGTCACGTAGTAATTTGGGGCGTGAAATTTACAAGCTTGCCACTGACCCTCGTCGCATAGTTGTGGTTTACCTTGGAAAGGCTGACAATGTGAGAGTAAGACTCCAGTGTTACGGCAGGAATGGAGCTCATTTGAGTAATAGTTGTTTGTCAGATGACTCTTCTCTTCGAATGGGAAGGTCGTTGTTTCAGGAGATATTTTCCCAAGGCTTCCCAATTGTTTATAGATGGGCTCCTATGCAAAACGAGGGAGATGCCCTGAGAACAGAATCTCAGCTGCTTAGTGCTTATGATTATGCATGGAACACAATCAGTAATGGTACACGGCGGCCTGATGATATTCTTCAAATGCTCAACAAATTAGCTTCAGGCACTAGAACATTTTCAGATATGGCCAAGTTGCTTCTTCCCTTCACTCAGAGGAAAGTGGGGATACCGATTAAATCAAGCAAGCTGCCTCTGATAGATGACAAATTGGATGAAGCTGACAGTGGCAGCTATAATGTCCTATCCCGTGTGTTCAAATTAAACAGGTCACGTCCTAGGATAGTTCAGGATACAACTGGTAGCAGTTCCACTCATGAGAATGCTAAAATTTGCGGACTGAAGTTAGCCGATGGTTCTATTTGTAAAAGGCCACCGGTTGAAAAAAGAGTAAGGTGTCCTGAACAGAAAGGAATGAGAATAAATGTGTCCACTGCCAAAGCAATCAGAGCACCCAAGTCAGAATTAGAAAGCATTGTCAGTAATGCATATAGTTACCGTAATGTTAGCCATGATGTAGAAGACCCTCCACAAAGAAAGGTTGAGAGTCATGTTGAGGAGAGTATCACTGAAACCATTTTATGTGGAATCATCTTGGATGATGGATCCACTTGTAGAAGACAACCGGTTAAAGGGAGAAAAAGGTGCCAGGAGCATAAAGGGAGGAGAATTCGTGCAAATCAGAAATAA 1146 0.4319 MVINRLKREQCDRTKHDSSFSRWKILIGPSDWEDHSKGKDGSARYRIHNLPQKLGPGVYELGVAVSRSNLGREIYKLATDPRRIVVVYLGKADNVRVRLQCYGRNGAHLSNSCLSDDSSLRMGRSLFQEIFSQGFPIVYRWAPMQNEGDALRTESQLLSAYDYAWNTISNGTRRPDDILQMLNKLASGTRTFSDMAKLLLPFTQRKVGIPIKSSKLPLIDDKLDEADSGSYNVLSRVFKLNRSRPRIVQDTTGSSSTHENAKICGLKLADGSICKRPPVEKRVRCPEQKGMRINVSTAKAIRAPKSELESIVSNAYSYRNVSHDVEDPPQRKVESHVEESITETILCGIILDDGSTCRRQPVKGRKRCQEHKGRRIRANQK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3408 381 Pfam GIY-YIG domain-containing protein 20 179 - -
Mal3g3408 381 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 2 377 IPR038909 GO:0003677|GO:0006355
Mal3g3408 381 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 2 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3408 Mal-Chr3 110890451 110893432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3408 1 378 HRT Transcription Factor Family AT5G56780 40.827 5.33e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Mal3g3408 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3408 - - lang:109350609 465.692